RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	CTRB2	Q6GPI1	263 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	TAPT1	Q6NXT6	567 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	DNAJC24	Q6P3W2	148 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	TMC5	Q6UXY8	1006 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	TIFAB	Q6ZNK6	161 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	PLEKHH3	Q7Z736	793 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	CTAGE3P	Q8IX95	158 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	THNSL1	Q8IYQ7	743 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	HACE1	Q8IYU2	909 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	SLC38A6	Q8IZM9	456 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	DSEL	Q8IZU8	1212 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	SPART	Q8N0X7	666 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	ASCC1	Q8N9N2	400 aa	Known RBP	10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	OSCP1	Q8WVF1	389 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	CPA5	Q8WXQ8	436 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	COPS5	Q92905	334 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	ZUFSP	Q96AP4	578 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	SDCCAG3	Q96C92	435 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	CNDP1	Q96KN2	507 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	ZNF778	Q96MU6	729 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	CDRT15	Q96T59	188 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	TMEM121	Q9BTD3	319 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	C20orf27	Q9GZN8	174 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	TRIT1	Q9H3H1	467 aa	Known RBP	10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	CYP3A43	Q9HB55	503 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	GBA2	Q9HCG7	927 aa	Predicted RBP	10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	DIABLO	Q9NR28	239 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	CISH	Q9NSE2	258 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	10.89	□□□□□ -0.67	3e-6	■■□□□ 12.3
CHD2-223	ENST00000636306	STMN3	Q9NZ72	180 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	XPO7	Q9UIA9	1087 aa	Known RBP	10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	TESMIN	Q9Y4I5	508 aa		10.89	□□□□□ -0.67
CHD2-223	ENST00000636306	PLOD2	O00469	737 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	ZNF195	O14628	629 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	RFPL1	O75677	317 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	GABBR2	O75899	941 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	SEC14L2	O76054	403 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	HOXD8	P13378	290 aa	Predicted RBP	10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	NAGA	P17050	411 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	PTPN1	P18031	435 aa	Known RBP	10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	POLR2C	P19387	275 aa	Predicted RBP	10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	NCF2	P19878	526 aa	Predicted RBP	10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	ENPP1	P22413	925 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	MMP8	P22894	467 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	SLC7A1	P30825	629 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	CDH5	P33151	784 aa	Predicted RBP	10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	SERPINB9	P50453	376 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	PPP2R2B	Q00005	443 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	TRAP1	Q12931	704 aa	Known RBP	10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	NPTX1	Q15818	432 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	CRY1	Q16526	586 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	DUSP28	Q4G0W2	176 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	MSS51	Q4VC12	460 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	PPP6R3	Q5H9R7	873 aa	Predicted RBP	10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	PERM1	Q5SV97	790 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	LRRC38	Q5VT99	294 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	MBLAC2	Q68D91	279 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	IQSEC1	Q6DN90	963 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	UGT3A1	Q6NUS8	523 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	KIAA0408	Q6ZU52	694 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	KCTD8	Q6ZWB6	473 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	MYO1H	Q8N1T3	1032 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	LINC01465	Q8N7H1	131 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	OR6J1	Q8NGC5	347 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	FEZF2	Q8TBJ5	459 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	TRAPPC12	Q8WVT3	735 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	ZNF606	Q8WXB4	792 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	CPT1B	Q92523	772 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	BCL7B	Q9BQE9	202 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	WDR83	Q9BRX9	315 aa	Known RBP	10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	CENPO	Q9BU64	300 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	SLC4A5	Q9BY07	1137 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	PDGFC	Q9NRA1	345 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	LOC100653049	A0A140TA62	436 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	TCRBV9S1A1T	A0A576	114 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	ZSCAN5B	A6NJL1	495 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	TLR3	O15455	904 aa	Known RBP	10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	BANF1	O75531	89 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	KRT34	O76011	436 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	STAU1	O95793	577 aa	Known RBP	10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	BMP2	P12643	396 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	KRT10	P13645	584 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	ETS1	P14921	441 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	ITIH1	P19827	911 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	PSMD8	P48556	350 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	NUDT2	P50583	147 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	HLCS	P50747	726 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	ECT2L	Q008S8	904 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	MS4A2	Q01362	244 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	NME3	Q13232	169 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	CEACAM7	Q14002	265 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	BBS9	Q3SYG4	887 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	FASTKD1	Q53R41	847 aa	Known RBP	10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	CEP78	Q5JTW2	689 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	INTS11	Q5TA45	600 aa	Known RBP	10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	RNF19B	Q6ZMZ0	732 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	IDO2	Q6ZQW0	420 aa		10.88	□□□□□ -0.67

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