RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 UBA2Q9UBT2 640 aaPredicted RBP18.19■□□□□ 0.5
PNKP-225ENST00000636214 WDFY3Q8IZQ1 3526 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 TRABD2BA6NFA1 517 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 WASH4PA8MWX3 477 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 EIF3CLB5ME19 914 aaKnown RBP18.18■□□□□ 0.5
PNKP-225ENST00000636214 EEF2KO00418 725 aaKnown RBP18.18■□□□□ 0.5
PNKP-225ENST00000636214 FFAR2O15552 330 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 DGKAP23743 735 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 RABIFP47224 123 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 HNRNPKP61978 463 aaKnown RBP eCLIP18.18■□□□□ 0.5
PNKP-225ENST00000636214 KLHL30Q0D2K2 578 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 ZNF211Q13398 564 aaPredicted RBP18.18■□□□□ 0.5
PNKP-225ENST00000636214 SERINC3Q13530 473 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 PPP1R15BQ5SWA1 713 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 CFAP58Q5T655 872 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 HES3Q5TGS1 186 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 IRF2BP2Q7Z5L9 587 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 TTC7BQ86TV6 843 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 MARCH9Q86YJ5 346 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 BAP1Q92560 729 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 NXPE2Q96DL1 559 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 TRIM11Q96F44 468 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 EIF3CQ99613 913 aaKnown RBP18.18■□□□□ 0.5
PNKP-225ENST00000636214 TTYH3Q9C0H2 523 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 TAS2R14Q9NYV8 317 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 AP4E1Q9UPM8 1137 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 SCINQ9Y6U3 715 aa18.18■□□□□ 0.5
PNKP-225ENST00000636214 A0A1W2PQC6 194 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 IGLON5A6NGN9 336 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 ARHGAP42A6NI28 874 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 ATMINO43313 823 aaPredicted RBP18.17■□□□□ 0.5
PNKP-225ENST00000636214 SIGLEC6O43699 453 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 PRPSAP2O60256 369 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 PIAS2O75928 621 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 CYP4F3Q08477 520 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 MAMLD1Q13495 774 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 GRM3Q14832 879 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 PARGQ86W56 976 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 UMODL1-AS1Q8N2C9 162 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 PAF1Q8N7H5 531 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 DENND6BQ8NEG7 585 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 OR4C6Q8NH72 309 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 ZNF653Q96CK0 615 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 DUSP23Q9BVJ7 150 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 DHX35Q9H5Z1 703 aaKnown RBP18.17■□□□□ 0.5
PNKP-225ENST00000636214 HAUS4Q9H6D7 363 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 LHX6Q9UPM6 363 aa18.17■□□□□ 0.5
PNKP-225ENST00000636214 CACNA1GO43497 2377 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 TAF4O00268 1085 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 ACP1P24666 158 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 ABL2P42684 1182 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 DUSP3P51452 185 aaPredicted RBP18.16■□□□□ 0.5
PNKP-225ENST00000636214 THOP1P52888 689 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 E2F1Q01094 437 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 PDE1CQ14123 709 aaPredicted RBP18.16■□□□□ 0.5
PNKP-225ENST00000636214 PTK2BQ14289 1009 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 PROX2Q3B8N5 592 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 ERMARDQ5T6L9 678 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 PLEKHA7Q6IQ23 1121 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 KANSL1Q7Z3B3 1105 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 DNAAF5Q86Y56 855 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 ASB12Q8WXK4 309 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 TSC1Q92574 1164 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 LENG8Q96PV6 779 aaPredicted RBP18.16■□□□□ 0.5
PNKP-225ENST00000636214 C1QTNF2Q9BXJ5 285 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 NOL6Q9H6R4 1146 aaKnown RBP18.16■□□□□ 0.5
PNKP-225ENST00000636214 GPATCH2LQ9NWQ4 482 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 NLGN3Q9NZ94 848 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 DKK4Q9UBT3 224 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 CNOT8Q9UFF9 292 aaKnown RBP18.16■□□□□ 0.5
PNKP-225ENST00000636214 ITM2BQ9Y287 266 aa18.16■□□□□ 0.5
PNKP-225ENST00000636214 POM121BA6NF01 834 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 FTLP02792 175 aaPredicted RBP18.15■□□□□ 0.5
PNKP-225ENST00000636214 GZMAP12544 262 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 NDST2P52849 883 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 ELP6Q0PNE2 266 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 FGL2Q14314 439 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 TDRD12Q587J7 1177 aaKnown RBP18.15■□□□□ 0.5
PNKP-225ENST00000636214 ZNF542PQ5EBM4 170 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 VPS36Q86VN1 386 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 SLC22A18ASQ8N1D0 253 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 SLC25A45Q8N413 288 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 BMFQ96LC9 184 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 MRPL47Q9HD33 250 aaKnown RBP18.15■□□□□ 0.5
PNKP-225ENST00000636214 UCKL1Q9NWZ5 548 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 AIPL1Q9NZN9 384 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 DKK3Q9UBP4 350 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 PCSK1NQ9UHG2 260 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 GGT7Q9UJ14 662 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 RAXQ9Y2V3 346 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 AK5Q9Y6K8 562 aa18.15■□□□□ 0.5
PNKP-225ENST00000636214 SPTY2D1-AS1A0A0U1RR47 76 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 A0A1B0GTH6 734 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 TRIM38O00635 465 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 RAD51BO15315 384 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 TM7SF2O76062 418 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 CAPNS1P04632 268 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 MYBL1P10243 752 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 SUOXP51687 545 aa18.14■□□□□ 0.49
PNKP-225ENST00000636214 ZNF135P52742 658 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms