RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 PIP4K2CQ8TBX8 421 aa8.63□□□□□ -1.03
CDKL5-209ENST00000635828 ACTRT1Q8TDG2 376 aa8.63□□□□□ -1.03
CDKL5-209ENST00000635828 UCMAQ8WVF2 138 aa8.63□□□□□ -1.03
CDKL5-209ENST00000635828 KLK6Q92876 244 aa8.63□□□□□ -1.03
CDKL5-209ENST00000635828 PWWP2AQ96N64 755 aa8.63□□□□□ -1.03
CDKL5-209ENST00000635828 MGME1Q9BQP7 344 aa8.63□□□□□ -1.03
CDKL5-209ENST00000635828 MLPHQ9BV36 600 aaPredicted RBP8.63□□□□□ -1.03
CDKL5-209ENST00000635828 EPC1Q9H2F5 836 aa8.63□□□□□ -1.03
CDKL5-209ENST00000635828 BCCIPQ9P287 314 aaKnown RBP eCLIP8.63□□□□□ -1.03
CDKL5-209ENST00000635828 CFAP47Q6ZTR5 3102 aa8.63□□□□□ -1.03
CDKL5-209ENST00000635828 TRAFD1O14545 582 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 MCF2LO15068 1137 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 PMPCBO75439 489 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 NR2C2P49116 596 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 TPMTP51580 245 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 TAS2R38P59533 333 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 CNTN1Q12860 1018 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 LRRC32Q14392 662 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 INO80DQ53TQ3 878 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 RFLNAQ6ZTI6 216 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 PARS2Q7L3T8 475 aaKnown RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 MAGOHBQ96A72 148 aaKnown RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 TRIM56Q9BRZ2 755 aaKnown RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 TRIM51Q9BSJ1 452 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 EBF2Q9HAK2 575 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 EFR3BQ9Y2G0 817 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 THADAQ6YHU6 1953 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 AURKAO14965 403 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 PPP1R12AO14974 1030 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 PRLP01236 227 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 MAOBP27338 520 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 ZNF135P52742 658 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 SULT2A1Q06520 285 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 HNRNPDQ14103 355 aaKnown RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 SMAD1Q15797 465 aaKnown RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 CST6Q15828 149 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 CCDC137Q6PK04 289 aaKnown RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 LAYNQ6UX15 382 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 SUGP1Q8IWZ8 645 aaKnown RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 TSTD1Q8NFU3 115 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 MSANTD3Q96H12 275 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 PBKQ96KB5 322 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 TEKT5Q96M29 485 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 NELL2Q99435 816 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 RSPH9Q9H1X1 276 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 PRDM16Q9HAZ2 1276 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 KLHL8Q9P2G9 620 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 IL36AQ9UHA7 158 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 MBD1Q9UIS9 605 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 ATP8A1Q9Y2Q0 1164 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 EP300Q09472 2414 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 EDDM13A0A1B0GTR0 161 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 PRR33A8MZF0 331 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 TIMM44O43615 452 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 RNASEH2AO75792 299 aaKnown RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 ASLP04424 464 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 ZFXP17010 805 aaPredicted RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 NNMTP40261 264 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 SLC7A5Q01650 507 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 TCF15Q12870 199 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 ELAVL3Q14576 367 aaKnown RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 PTPRCAPQ14761 206 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 CCDC6Q16204 474 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 DENND2CQ68D51 928 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 NCEH1Q6PIU2 408 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 ARMCX6Q7L4S7 300 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 NOA1Q8NC60 698 aaKnown RBP8.62□□□□□ -1.03
CDKL5-209ENST00000635828 PRSS33Q8NF86 280 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 KRT12Q99456 494 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 SLC8A2Q9UPR5 921 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 COQ6Q9Y2Z9 468 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 PCDHB9Q9Y5E1 797 aa8.62□□□□□ -1.03
CDKL5-209ENST00000635828 CCDC78A2IDD5 438 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 TTI1O43156 1089 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 HRO43593 1189 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 BUD23O43709 281 aaKnown RBP8.61□□□□□ -1.03
CDKL5-209ENST00000635828 AGTP01019 485 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 MX2P20592 715 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 MAT2AP31153 395 aaKnown RBP8.61□□□□□ -1.03
CDKL5-209ENST00000635828 P2RY2P41231 377 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 ABL2P42684 1182 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 SKOR1P84550 965 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 BMP8AQ7Z5Y6 402 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 TSPAN33Q86UF1 283 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 PELI3Q8N2H9 469 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 SIPA1Q96FS4 1042 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 MYOCQ99972 504 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 TRPM6Q9BX84 2022 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 TRIM31Q9BZY9 425 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 CA5BQ9Y2D0 317 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 MRFAP1Q9Y605 127 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 SPAG17Q6Q759 2223 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 WNT9AO14904 365 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 TCP1P17987 556 aaKnown RBP8.61□□□□□ -1.03
CDKL5-209ENST00000635828 RPL22P35268 128 aaKnown RBP8.61□□□□□ -1.03
CDKL5-209ENST00000635828 COILP38432 576 aaPredicted RBP8.61□□□□□ -1.03
CDKL5-209ENST00000635828 PPP2CBP62714 309 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 PPP2CAP67775 309 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 IFI35P80217 286 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms