RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CEP76Q8TAP6 659 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 MS4A14Q96JA4 679 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 PSMB7Q99436 277 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 GAREM1Q9H706 876 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 FAM204AQ9H8W3 233 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 AGPAT3Q9NRZ7 376 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 KCNK4Q9NYG8 393 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 EVLQ9UI08 416 aaPredicted RBP4.99□□□□□ -1.61
LINC00550-201ENST00000629293 INTUQ9ULD6 942 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 WASF3Q9UPY6 502 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 DAAM1Q9Y4D1 1078 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 PTPN13Q12923 2485 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 ASH1LQ9NR48 2969 aaKnown RBP4.99□□□□□ -1.61
LINC00550-201ENST00000629293 TAF4O00268 1085 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 DDX3XO00571 662 aaKnown RBP eCLIP4.99□□□□□ -1.61
LINC00550-201ENST00000629293 CYP26A1O43174 497 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 PRODHO43272 600 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 BEST1O76090 585 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 PGRP06401 933 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 ACADMP11310 421 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 CSNK1EP49674 416 aaKnown RBP4.99□□□□□ -1.61
LINC00550-201ENST00000629293 NOP14P78316 857 aaKnown RBP4.99□□□□□ -1.61
LINC00550-201ENST00000629293 IL9RQ01113 521 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 CYP24A1Q07973 514 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 GRIK2Q13002 908 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 ALCAMQ13740 583 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 GALEQ14376 348 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 ZSCAN26Q16670 478 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 DCAF17Q5H9S7 520 aaPredicted RBP4.99□□□□□ -1.61
LINC00550-201ENST00000629293 WDR45BQ5MNZ6 344 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 C8orf74Q6P047 294 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 SLC36A4Q6YBV0 504 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 C8orf86Q6ZUL3 223 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 PROSER1Q86XN7 944 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 MREGQ8N565 214 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 GANCQ8TET4 914 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 TNIP3Q96KP6 325 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 MRGPRX1Q96LB2 322 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 TTLL2Q9BWV7 592 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 MKRN2Q9H000 416 aaKnown RBP4.99□□□□□ -1.61
LINC00550-201ENST00000629293 GSX1Q9H4S2 264 aaPredicted RBP4.99□□□□□ -1.61
LINC00550-201ENST00000629293 HMGXB4Q9UGU5 601 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 NEUROG3Q9Y4Z2 214 aa4.99□□□□□ -1.61
LINC00550-201ENST00000629293 A0A1W2PQF6 199 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 BLACEA4D250 179 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 F8VZ95 297 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 TULP2O00295 520 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 NEMP1O14524 444 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 ZNF217O75362 1048 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 GLI1P08151 1106 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 NCAM1P13591 858 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 HLA-EP13747 358 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 CD59P13987 128 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 FERP16591 822 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 PSMC2P35998 433 aaKnown RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 ATP5C1P36542 298 aaKnown RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 TNFRSF4P43489 277 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 PPP3CCP48454 512 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 CLDN6P56747 220 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 EFEMP1Q12805 493 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 FUT11Q495W5 492 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 C4orf46Q504U0 113 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 SERPINA13PQ6UXR4 307 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 ADAT2Q7Z6V5 191 aaKnown RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 TMPRSS6Q8IU80 811 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 NAXDQ8IW45 347 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 FAM186BQ8IYM0 893 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 IL22RA1Q8N6P7 574 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 EIF1ADQ8N9N8 165 aaKnown RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 PDZD8Q8NEN9 1154 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 SIPA1Q96FS4 1042 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 SMARCD1Q96GM5 515 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 SPAG5Q96R06 1193 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 CGRRF1Q99675 332 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 TLR8Q9NR97 1041 aaKnown RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 RASAL2Q9UJF2 1139 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 GDF2Q9UK05 429 aaPredicted RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 COL12A1Q99715 3063 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 GOLGA6BA6NDN3 693 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 TMEM8BA6NDV4 472 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 TSPAN3O60637 253 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 RFPL1O75677 317 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 EIF2DP41214 584 aaKnown RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 FMO5P49326 533 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 NDST1P52848 882 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 PREPLQ4J6C6 727 aaPredicted RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 ALKBH5Q6P6C2 394 aaKnown RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 GJB7Q6PEY0 223 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 GPRIN1Q7Z2K8 1008 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 FUKQ8N0W3 1084 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 CACTIN-AS1Q8N1I8 211 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 PPM1KQ8N3J5 372 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 RASGEF1CQ8N431 466 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 ACTRT1Q8TDG2 376 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 GDAP1L1Q96MZ0 367 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 KIAA1586Q9HCI6 787 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 CRIM1Q9NZV1 1036 aa4.98□□□□□ -1.61
LINC00550-201ENST00000629293 APOBEC2Q9Y235 224 aaKnown RBP4.98□□□□□ -1.61
LINC00550-201ENST00000629293 ANAPC1Q9H1A4 1944 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms