RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 XIRP2A4UGR9 3374 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.68□□□□□ -0.54
PTPN7-219ENST00000629151 FAM187AA6NFU0 413 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 AP3B1O00203 1094 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 LAMTOR5O43504 91 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 PI15O43692 258 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 BNIP3LO60238 219 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 ZNF217O75362 1048 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 PDGFBP01127 241 aaPredicted RBP11.68□□□□□ -0.54
PTPN7-219ENST00000629151 DNTTP04053 509 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 HLA-DQB2P05538 268 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 ACADMP11310 421 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 AVPR2P30518 371 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 NUMBP49757 651 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 GEMP55040 296 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 DR1Q01658 176 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 SATB1Q01826 763 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 MPP3Q13368 585 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 GAS6Q14393 721 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 PPP1R7Q15435 360 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 CST6Q15828 149 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 ZNF805Q5CZA5 627 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 ARSIQ5FYB1 569 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 TMEM31Q5JXX7 168 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 CFAP58Q5T655 872 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 BRAT1Q6PJG6 821 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 USP30Q70CQ3 517 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 KBTBD6Q86V97 674 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 TMPRSS6Q8IU80 811 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 STK40Q8N2I9 435 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 PGBD5Q8N414 524 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 DTWD2Q8NBA8 298 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 ARRDC2Q8TBH0 407 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 RAB7BQ96AH8 199 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 SIPA1Q96FS4 1042 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 ADGRE3Q9BY15 652 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 SUV39H2Q9H5I1 410 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 L2HGDHQ9H9P8 463 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 CD248Q9HCU0 757 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 EVLQ9UI08 416 aaPredicted RBP11.68□□□□□ -0.54
PTPN7-219ENST00000629151 FBXO4Q9UKT5 387 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 TTLL3Q9Y4R7 772 aa11.68□□□□□ -0.54
PTPN7-219ENST00000629151 DOCK4Q8N1I0 1966 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 TCRBV21S2A2A0A5A6 115 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 SMAPO00193 183 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 MUSKO15146 869 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 SLC7A4O43246 635 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 HTRA2O43464 458 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-219ENST00000629151 IL1BP01584 269 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 KRT14P02533 472 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 ITGB7P26010 798 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 OXTRP30559 389 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 SLC8A1P32418 973 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 KCNJ1P48048 391 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 MAXP61244 160 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 RPS14P62263 151 aaKnown RBP11.67□□□□□ -0.54
PTPN7-219ENST00000629151 CDK16Q00536 496 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 GLE1Q53GS7 698 aaKnown RBP11.67□□□□□ -0.54
PTPN7-219ENST00000629151 ATXN7L2Q5T6C5 722 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-219ENST00000629151 TTC27Q6P3X3 843 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 TMEM92Q6UXU6 159 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 PCGF5Q86SE9 256 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 LINC00523Q86TU6 105 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 RASSF3Q86WH2 238 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 C1orf210Q8IVY1 113 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 KLHL7Q8IXQ5 586 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 KLHDC8BQ8IXV7 354 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 PAF1Q8N7H5 531 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 ZNF366Q8N895 744 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 BBOF1Q8ND07 529 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 PIP4K2CQ8TBX8 421 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 CCDC110Q8TBZ0 833 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 TADA1Q96BN2 335 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 MRGPRX1Q96LB2 322 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 PRRX2Q99811 253 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 HDAC8Q9BY41 377 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 DDX47Q9H0S4 455 aaKnown RBP11.67□□□□□ -0.54
PTPN7-219ENST00000629151 ZDHHC6Q9H6R6 413 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 NOD2Q9HC29 1040 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 ITM2CQ9NQX7 267 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 SMARCAL1Q9NZC9 954 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 BCCIPQ9P287 314 aaKnown RBP eCLIP11.67□□□□□ -0.54
PTPN7-219ENST00000629151 TPX2Q9ULW0 747 aaKnown RBP11.67□□□□□ -0.54
PTPN7-219ENST00000629151 WASF2Q9Y6W5 498 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 COL4A3Q01955 1670 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 F5P12259 2224 aa11.67□□□□□ -0.54
PTPN7-219ENST00000629151 E7EVH7 732 aa11.66□□□□□ -0.54
PTPN7-219ENST00000629151 LEFTY1O75610 366 aa11.66□□□□□ -0.54
PTPN7-219ENST00000629151 NFKB1P19838 968 aa11.66□□□□□ -0.54
PTPN7-219ENST00000629151 XPAP23025 273 aaPredicted RBP11.66□□□□□ -0.54
PTPN7-219ENST00000629151 CD68P34810 354 aaPredicted RBP11.66□□□□□ -0.54
PTPN7-219ENST00000629151 RPL22P35268 128 aaKnown RBP11.66□□□□□ -0.54
PTPN7-219ENST00000629151 CD86P42081 329 aa11.66□□□□□ -0.54
PTPN7-219ENST00000629151 RGRP47804 291 aa11.66□□□□□ -0.54
PTPN7-219ENST00000629151 COPAP53621 1224 aa11.66□□□□□ -0.54
PTPN7-219ENST00000629151 GDF10P55107 478 aa11.66□□□□□ -0.54
PTPN7-219ENST00000629151 SARNPP82979 210 aaKnown RBP11.66□□□□□ -0.54
PTPN7-219ENST00000629151 SKOR1P84550 965 aa11.66□□□□□ -0.54
PTPN7-219ENST00000629151 DSC2Q02487 901 aa11.66□□□□□ -0.54
PTPN7-219ENST00000629151 NIPAL4Q0D2K0 466 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms