RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 UBA2Q9UBT2 640 aaPredicted RBP11.27□□□□□ -0.61
DDX41-219ENST00000629036 IPO11Q9UI26 975 aaKnown RBP11.27□□□□□ -0.61
DDX41-219ENST00000629036 ZFR2Q9UPR6 939 aaKnown RBP11.27□□□□□ -0.61
DDX41-219ENST00000629036 DUSP10Q9Y6W6 482 aa11.27□□□□□ -0.61
DDX41-219ENST00000629036 COL5A1P20908 1838 aaPredicted RBP11.27□□□□□ -0.61
DDX41-219ENST00000629036 GOLGA4Q13439 2230 aaKnown RBP11.27□□□□□ -0.61
DDX41-219ENST00000629036 A0A1W2PPC4 97 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 A0A1W2PR77 199 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 MEI4A8MW99 385 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 KPNA3O00505 521 aaPredicted RBP11.26□□□□□ -0.61
DDX41-219ENST00000629036 GIPC1O14908 333 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 AREL1O15033 823 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 KHNYNO15037 678 aaKnown RBP11.26□□□□□ -0.61
DDX41-219ENST00000629036 FOXD2O60548 495 aaPredicted RBP11.26□□□□□ -0.61
DDX41-219ENST00000629036 TOP3BO95985 862 aaKnown RBP11.26□□□□□ -0.61
DDX41-219ENST00000629036 WNT1P04628 370 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 KRT7P08729 469 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 ADRB3P13945 408 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 ENGP17813 658 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 COMTP21964 271 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 KDELR1P24390 212 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 CD27P26842 260 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 CYLC1P35663 651 aaPredicted RBP11.26□□□□□ -0.61
DDX41-219ENST00000629036 GJC1P36383 396 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 GBE1Q04446 702 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 SLC10A7Q0GE19 358 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 GRIK2Q13002 908 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 FGL2Q14314 439 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 PDK2Q15119 407 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 HADHQ16836 314 aaKnown RBP11.26□□□□□ -0.61
DDX41-219ENST00000629036 ZNF284Q2VY69 593 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 MYLK3Q32MK0 819 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 WDR45BQ5MNZ6 344 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 FAM46CQ5VWP2 391 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 SLC9A4Q6AI14 798 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 C11orf63Q6NUN7 778 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 LAYNQ6UX15 382 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 ERN2Q76MJ5 926 aaKnown RBP11.26□□□□□ -0.61
DDX41-219ENST00000629036 LRRC57Q8N9N7 239 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 KDF1Q8NAX2 398 aaPredicted RBP11.26□□□□□ -0.61
DDX41-219ENST00000629036 SPC24Q8NBT2 197 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 TSEN2Q8NCE0 465 aaKnown RBP11.26□□□□□ -0.61
DDX41-219ENST00000629036 OR2I1PQ8NGU4 316 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 OR14C36Q8NHC7 312 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 TPCN2Q8NHX9 752 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 CEP76Q8TAP6 659 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 MAML1Q92585 1016 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 CCDC114Q96M63 670 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 GDAP1L1Q96MZ0 367 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 RNF157Q96PX1 679 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 PSKH2Q96QS6 385 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 ZDHHC6Q9H6R6 413 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 PREBQ9HCU5 417 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 DONSONQ9NYP3 566 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 GGT7Q9UJ14 662 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 HPCAL4Q9UM19 191 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 SLC6A14Q9UN76 642 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 NCKAP1Q9Y2A7 1128 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 LOC400499M0QZD8 3231 aa11.26□□□□□ -0.61
DDX41-219ENST00000629036 MYLKQ15746 1914 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 PTPRBP23467 1997 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 A0A1B0GTW7 788 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 LRRC72A6NJI9 287 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 DFFAO00273 331 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 BCAT2O15382 392 aaPredicted RBP11.25□□□□□ -0.61
DDX41-219ENST00000629036 DAPK3O43293 454 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 AP1G1O43747 822 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 FSBPO95073 299 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 MAP3K6O95382 1288 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 PIGNO95427 931 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 IGSF6O95976 241 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 UGT2B4P06133 528 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 SLC1A1P43005 524 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 CSNK1DP48730 415 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 VAV2P52735 878 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 RHOAP61586 193 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 SNRPD1P62314 119 aaKnown RBP11.25□□□□□ -0.61
DDX41-219ENST00000629036 ADCY2Q08462 1091 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 KRT81Q14533 505 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 ZNF805Q5CZA5 627 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 SYCP2LQ5T4T6 812 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 TMCO4Q5TGY1 634 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 ALG1LQ6GMV1 187 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 TEX26Q8N6G2 289 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 TMEM145Q8NBT3 493 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 GANCQ8TET4 914 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 SPOCK2Q92563 424 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 KRT35Q92764 455 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 FATE1Q969F0 183 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 ECHDC3Q96DC8 303 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 LRIG1Q96JA1 1093 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 SLC6A18Q96N87 628 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 ZNF599Q96NL3 588 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 OLFM3Q96PB7 478 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 BAG1Q99933 345 aaPredicted RBP11.25□□□□□ -0.61
DDX41-219ENST00000629036 MGME1Q9BQP7 344 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 HERPUD2Q9BSE4 406 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 DESI2Q9BSY9 194 aa11.25□□□□□ -0.61
DDX41-219ENST00000629036 CPEB1Q9BZB8 566 aaKnown RBP11.25□□□□□ -0.61
DDX41-219ENST00000629036 DTLQ9NZJ0 730 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms