RNA–Protein interactions for RNA: ENST00000625664.2

USP8-219, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5 BASIC

Gene USP8, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-219ENST00000625664 CNTNAP3Q9BZ76 1288 aa12.79□□□□□ -0.36
USP8-219ENST00000625664 DEF6Q9H4E7 631 aa12.79□□□□□ -0.36
USP8-219ENST00000625664 PDFQ9HBH1 243 aa12.79□□□□□ -0.36
USP8-219ENST00000625664 GDF3Q9NR23 364 aa12.79□□□□□ -0.36
USP8-219ENST00000625664 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.79□□□□□ -0.36
USP8-219ENST00000625664 IMPACTQ9P2X3 320 aa12.79□□□□□ -0.36
USP8-219ENST00000625664 LHX3Q9UBR4 397 aa12.79□□□□□ -0.36
USP8-219ENST00000625664 IP6K2Q9UHH9 426 aa12.79□□□□□ -0.36
USP8-219ENST00000625664 PCOLCE2Q9UKZ9 415 aa12.79□□□□□ -0.36
USP8-219ENST00000625664 NENFQ9UMX5 172 aa12.79□□□□□ -0.36
USP8-219ENST00000625664 MFHAS1Q9Y4C4 1052 aa12.79□□□□□ -0.36
USP8-219ENST00000625664 PCDHGB2Q9Y5G2 931 aa12.79□□□□□ -0.36
USP8-219ENST00000625664 FADS3Q9Y5Q0 445 aa12.79□□□□□ -0.36
USP8-219ENST00000625664 TRPM6Q9BX84 2022 aa12.79□□□□□ -0.36
USP8-219ENST00000625664 A0A1B0GTQ1 180 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 PRAMEF26H0Y7S4 382 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 H3BRJ5 948 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 MYO1FO00160 1098 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 DFFAO00273 331 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 INSIG1O15503 277 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 FLRT2O43155 660 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 PRAMEF11O60813 436 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 TPM1P09493 284 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 RARAP10276 462 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 ARL4AP40617 200 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 SSR1P43307 286 aaKnown RBP12.78□□□□□ -0.36
USP8-219ENST00000625664 NXPH1P58417 271 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 RAD51Q06609 339 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 MAPK8IP2Q13387 824 aaPredicted RBP12.78□□□□□ -0.36
USP8-219ENST00000625664 HNRNPDQ14103 355 aaKnown RBP12.78□□□□□ -0.36
USP8-219ENST00000625664 DPYSQ14117 519 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 SUZ12Q15022 739 aaKnown RBP12.78□□□□□ -0.36
USP8-219ENST00000625664 DPYSL2Q16555 572 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 SLC18A3Q16572 532 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 BOLA3Q53S33 107 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 ZNF805Q5CZA5 627 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 LRRC73Q5JTD7 316 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 GDPD4Q6W3E5 623 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 ARHGAP36Q6ZRI8 547 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 GATAD2AQ86YP4 633 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 CPNE8Q86YQ8 564 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 TP53INP2Q8IXH6 220 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 NIPA2Q8N8Q9 360 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 ZNF564Q8TBZ8 553 aaPredicted RBP12.78□□□□□ -0.36
USP8-219ENST00000625664 RHBDD1Q8TEB9 315 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 LRIG1Q96JA1 1093 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 PACSIN1Q9BY11 444 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 SP110Q9HB58 689 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 ZNHIT6Q9NWK9 470 aaKnown RBP12.78□□□□□ -0.36
USP8-219ENST00000625664 CTTNBP2NLQ9P2B4 639 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 ITM2BQ9Y287 266 aa12.78□□□□□ -0.36
USP8-219ENST00000625664 USP27XA6NNY8 438 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 NEMP1O14524 444 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 AKR1B10O60218 316 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 CBFA2T3O75081 653 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 MFAP3LO75121 409 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 HNRNPA2B1P22626 353 aaKnown RBP12.77□□□□□ -0.36
USP8-219ENST00000625664 AMPD1P23109 780 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 GJC1P36383 396 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 HCAR3P49019 387 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 ZNF135P52742 658 aaPredicted RBP12.77□□□□□ -0.36
USP8-219ENST00000625664 ADKP55263 362 aaKnown RBP12.77□□□□□ -0.36
USP8-219ENST00000625664 GSDMDP57764 484 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 TSR1Q2NL82 804 aaKnown RBP12.77□□□□□ -0.36
USP8-219ENST00000625664 TMEM259Q4ZIN3 620 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 DNTTIP2Q5QJE6 756 aaKnown RBP12.77□□□□□ -0.36
USP8-219ENST00000625664 AFMIDQ63HM1 303 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 POLNQ7Z5Q5 900 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 SPATS2Q86XZ4 545 aaKnown RBP12.77□□□□□ -0.36
USP8-219ENST00000625664 CTNNBL1Q8WYA6 563 aaPredicted RBP12.77□□□□□ -0.36
USP8-219ENST00000625664 FEM1CQ96JP0 617 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 CHP1Q99653 195 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 OSBPL1AQ9BXW6 950 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 ABHD10Q9NUJ1 306 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 ETNK2Q9NVF9 386 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 GGT7Q9UJ14 662 aa12.77□□□□□ -0.36
USP8-219ENST00000625664 EPG5Q9HCE0 2579 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 MAP1BP46821 2468 aaKnown RBP12.77□□□□□ -0.37
USP8-219ENST00000625664 AP1G1O43747 822 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 HYAL3O43820 417 aaPredicted RBP12.77□□□□□ -0.37
USP8-219ENST00000625664 PCDHGA12O60330 932 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 DFNA5O60443 496 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 PIGNO95427 931 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 ITIH2P19823 946 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 AKT2P31751 481 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 GRK6P43250 576 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 CLDN2P57739 230 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 RPS21P63220 83 aaKnown RBP12.77□□□□□ -0.37
USP8-219ENST00000625664 SHC2P98077 582 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 SLC25A11Q02978 314 aaKnown RBP12.77□□□□□ -0.37
USP8-219ENST00000625664 FGL2Q14314 439 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 SHBQ15464 509 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 ASTE1Q2TB18 679 aaPredicted RBP12.77□□□□□ -0.37
USP8-219ENST00000625664 KIAA1161Q6NSJ0 714 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 DBX2Q6ZNG2 339 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 IQCHQ86VS3 1027 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 TMEM145Q8NBT3 493 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 TSEN2Q8NCE0 465 aaKnown RBP12.77□□□□□ -0.37
USP8-219ENST00000625664 TEKT4Q8WW24 435 aa12.77□□□□□ -0.37
USP8-219ENST00000625664 KLHDC7BQ96G42 594 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms