RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 POMKQ9H5K3 350 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 CHST12Q9NRB3 414 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 GTSE1Q9NYZ3 720 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 VPS28Q9UK41 221 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 SLC45A1Q9Y2W3 748 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 TCAF1Q9Y4C2 921 aa11.39□□□□□ -0.59
VARS2-213ENST00000625423 TCAF2A6NFQ2 919 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 AURKAO14965 403 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 DNAJA2O60884 412 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 CELF2O95319 508 aaKnown RBP11.38□□□□□ -0.59
VARS2-213ENST00000625423 PGM3O95394 542 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 PMLP29590 882 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 ADSLP30566 484 aaPredicted RBP11.38□□□□□ -0.59
VARS2-213ENST00000625423 RAB27AP51159 221 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 SCNN1GP51170 649 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 RPL26P61254 145 aaKnown RBP11.38□□□□□ -0.59
VARS2-213ENST00000625423 HERC3Q15034 1050 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 TIGD5Q53EQ6 642 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 RARS2Q5T160 578 aaKnown RBP11.38□□□□□ -0.59
VARS2-213ENST00000625423 AP1ARQ63HQ0 302 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 CNSTQ6PJW8 725 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 SCAMP5Q8TAC9 235 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 PDCD6IPQ8WUM4 868 aaKnown RBP11.38□□□□□ -0.59
VARS2-213ENST00000625423 RTP3Q9BQQ7 232 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 TRPV6Q9H1D0 765 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 OSBPL2Q9H1P3 480 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 CSNK1G1Q9HCP0 422 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 FAM105AQ9NUU6 356 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 UBAP1Q9NZ09 502 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 NCKIPSDQ9NZQ3 722 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 FLRT1Q9NZU1 646 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 RIMS3Q9UJD0 308 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 PCDHGB4Q9UN71 923 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 PCDHGB5Q9Y5G0 923 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 TRIP12Q14669 1992 aaPredicted RBP11.38□□□□□ -0.59
VARS2-213ENST00000625423 SDHDO14521 159 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 TADA2AO75478 443 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 PABPC4LP0CB38 370 aaKnown RBP11.38□□□□□ -0.59
VARS2-213ENST00000625423 ARSAP15289 507 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 CD151P48509 253 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 ZNF33AQ06730 810 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 CSHL1Q14406 222 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 GK5Q6ZS86 529 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 TRIM67Q6ZTA4 783 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 RPS27LQ71UM5 84 aaKnown RBP11.38□□□□□ -0.59
VARS2-213ENST00000625423 RNF135Q8IUD6 432 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 IL12RB2Q99665 862 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 FSD1LQ9BXM9 530 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 UBE2OQ9C0C9 1292 aaKnown RBP11.38□□□□□ -0.59
VARS2-213ENST00000625423 CYP4F12Q9HCS2 524 aa11.38□□□□□ -0.59
VARS2-213ENST00000625423 DENRO43583 198 aaKnown RBP11.37□□□□□ -0.59
VARS2-213ENST00000625423 NPHS1O60500 1241 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 HLA-DQB2P05538 268 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 PCSK1P29120 753 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 SLC12A2P55011 1212 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 NOMO2Q5JPE7 1267 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 RBM20Q5T481 1227 aaKnown RBP11.37□□□□□ -0.59
VARS2-213ENST00000625423 ZFP1Q6P2D0 407 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 MARVELD2Q8N4S9 558 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 PNPLA1Q8N8W4 532 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 C2CD4AQ8NCU7 369 aaPredicted RBP11.37□□□□□ -0.59
VARS2-213ENST00000625423 IRGQQ8WZA9 623 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 KLHL32Q96NJ5 620 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 NDNQ99608 321 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 PKP2Q99959 881 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 MRPL57Q9BQC6 102 aaKnown RBP11.37□□□□□ -0.59
VARS2-213ENST00000625423 TMLHEQ9NVH6 421 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 RBM22Q9NW64 420 aaKnown RBP eCLIP11.37□□□□□ -0.598e-7■■■■■ 29.1
VARS2-213ENST00000625423 ST3GAL5Q9UNP4 418 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 MATN3O15232 486 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 MSI1O43347 362 aaKnown RBP11.37□□□□□ -0.59
VARS2-213ENST00000625423 BCAS2O75934 225 aaPredicted RBP11.37□□□□□ -0.59
VARS2-213ENST00000625423 OR6B1O95007 311 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 CRTAMO95727 393 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 ZNF865P0CJ78 1059 aaPredicted RBP11.37□□□□□ -0.59
VARS2-213ENST00000625423 DNAJB1P25685 340 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 ADRA1AP35348 466 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 POLD2P49005 469 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 GEMP55040 296 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 PCSK7Q16549 785 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 POTEHQ6S545 545 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 ANKRD23Q86SG2 305 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 CEP70Q8NHQ1 597 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 PIP4K2CQ8TBX8 421 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 NCSTNQ92542 709 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 MAELQ96JY0 434 aaKnown RBP11.37□□□□□ -0.59
VARS2-213ENST00000625423 DMAP1Q9NPF5 467 aaPredicted RBP11.37□□□□□ -0.59
VARS2-213ENST00000625423 SFMBT1Q9UHJ3 866 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 BCAP29Q9UHQ4 241 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 FBXO5Q9UKT4 447 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 ARL5CA6NH57 179 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 TRPC5OSA6NMA1 111 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 KCNU1A8MYU2 1149 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 CLGNO14967 610 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 AP1G1O43747 822 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 PAGE1O75459 146 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 SMIM18P0DKX4 95 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 KCNA5P22460 613 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 GK3PQ14409 553 aa11.37□□□□□ -0.59
VARS2-213ENST00000625423 ZNF789Q5FWF6 425 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms