RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 BNIP3LO60238 219 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 USP12O75317 370 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 ZNF821O75541 412 aaPredicted RBP18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 VASPP50552 380 aaPredicted RBP18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 ARL4CP56559 192 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 WNT3AP56704 352 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 SNRPD1P62314 119 aaKnown RBP18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 OLIG2Q13516 323 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 IHHQ14623 411 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 KDELC1Q6UW63 502 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 SRLQ86TD4 932 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 RYBPQ8N488 228 aaPredicted RBP18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 OR2AP1Q8NGE2 309 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 AENQ8WTP8 325 aaKnown RBP18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 MYO19Q96H55 970 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 FICDQ9BVA6 458 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 FOXP3Q9BZS1 431 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 SLC2A4RGQ9NR83 387 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 ATG2BQ96BY7 2078 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 SUN1O94901 812 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 GSRP00390 522 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 GRIA1P42261 906 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 AP1S1P61966 158 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 MTM1Q13496 603 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 PON2Q15165 354 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 HIF1AQ16665 826 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 RALGPS1Q5JS13 557 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 NAPEPLDQ6IQ20 393 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 Q6ZVU0 165 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 KDELC2Q7Z4H8 507 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 OR6K2Q8NGY2 324 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 TADA1Q96BN2 335 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 MRGPRX2Q96LB1 330 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 SERPINB12Q96P63 405 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 TBL1YQ9BQ87 522 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 APOL2Q9BQE5 337 aa18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 FRMD8Q9BZ67 464 aaPredicted RBP18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 XAB2Q9HCS7 855 aaKnown RBP18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 EVLQ9UI08 416 aaPredicted RBP18.03■□□□□ 0.48
PTCHD3-202ENST00000622555 TCF20Q9UGU0 1960 aaKnown RBP18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 AGTP01019 485 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 RECQLP46063 649 aaPredicted RBP18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 CSNK1DP48730 415 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 ZNF234Q14588 700 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 SLC14A2Q15849 920 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 CARD16Q5EG05 197 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 FNBP1LQ5T0N5 605 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 IER5LQ5T953 404 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 EMBQ6PCB8 327 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 NCEH1Q6PIU2 408 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 ZNF534Q76KX8 674 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 HDXQ7Z353 690 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 LINC00523Q86TU6 105 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 CAND1Q86VP6 1230 aaKnown RBP18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 PDIK1LQ8N165 341 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 FRS2Q8WU20 508 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 NSMCE3Q96MG7 304 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 TSPYL1Q9H0U9 437 aa18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 PIH1D1Q9NWS0 290 aaKnown RBP18.02■□□□□ 0.48
PTCHD3-202ENST00000622555 GLULP15104 373 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 ADRA1AP35348 466 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 TNFRSF4P43489 277 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 TNNT3P45378 269 aaPredicted RBP18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 MAPK8P45983 427 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 LRRC8BQ6P9F7 803 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 CENPUQ71F23 418 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 ZNF366Q8N895 744 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 KDM1BQ8NB78 822 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 OR52K1Q8NGK4 314 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 IFT43Q96FT9 208 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 DUSP12Q9UNI6 340 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 PPFIA2O75334 1257 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 AVILO75366 819 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 CCNHP51946 323 aaPredicted RBP18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 DHX9Q08211 1270 aaKnown RBP18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 MYLK3Q32MK0 819 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 BBS9Q3SYG4 887 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 SLC44A4Q53GD3 710 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 EGFLAMQ63HQ2 1017 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 SERPINA13PQ6UXR4 307 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 DPY19L3Q6ZPD9 716 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 CEP128Q6ZU80 1094 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 DNAAF3Q8N9W5 541 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 MTG2Q9H4K7 406 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 SAYSD1Q9NPB0 183 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 THAP10Q9P2Z0 257 aaPredicted RBP18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 PCDHGC4Q9Y5F7 938 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 RAI2Q9Y5P3 530 aa18.01■□□□□ 0.47
PTCHD3-202ENST00000622555 ANTXRLA6NF34 631 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 K7EQS6 105 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 BANF1O75531 89 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 MLNP12872 115 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 HLA-EP13747 358 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 GKP32189 559 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 SEC13P55735 322 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 SESN2P58004 480 aaPredicted RBP18■□□□□ 0.47
PTCHD3-202ENST00000622555 CDK18Q07002 472 aa18■□□□□ 0.47
PTCHD3-202ENST00000622555 GRSF1Q12849 480 aaKnown RBP eCLIP18■□□□□ 0.47
PTCHD3-202ENST00000622555 PDIA2Q13087 525 aaKnown RBP18■□□□□ 0.47
PTCHD3-202ENST00000622555 MSS51Q4VC12 460 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms