RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 NUMBP49757 651 aa21.94■■□□□ 1.1
PCSK6-220ENST00000622483 GALNT2Q10471 571 aa21.94■■□□□ 1.1
PCSK6-220ENST00000622483 REP15Q6BDI9 236 aa21.94■■□□□ 1.1
PCSK6-220ENST00000622483 PPP4R4Q6NUP7 873 aa21.94■■□□□ 1.1
PCSK6-220ENST00000622483 MCUQ8NE86 351 aa21.94■■□□□ 1.1
PCSK6-220ENST00000622483 URGCPQ8TCY9 931 aa21.94■■□□□ 1.1
PCSK6-220ENST00000622483 KCTD4Q8WVF5 259 aa21.94■■□□□ 1.1
PCSK6-220ENST00000622483 TRUB1Q8WWH5 349 aaKnown RBP21.94■■□□□ 1.1
PCSK6-220ENST00000622483 IL12RB2Q99665 862 aa21.94■■□□□ 1.1
PCSK6-220ENST00000622483 EFHD1Q9BUP0 239 aa21.94■■□□□ 1.1
PCSK6-220ENST00000622483 ZNF518BQ9C0D4 1074 aa21.94■■□□□ 1.1
PCSK6-220ENST00000622483 ZNF112Q9UJU3 913 aa21.94■■□□□ 1.1
PCSK6-220ENST00000622483 ITGB1BP2Q9UKP3 347 aa21.94■■□□□ 1.1
PCSK6-220ENST00000622483 PCDHA10Q9Y5I2 948 aa21.94■■□□□ 1.1
PCSK6-220ENST00000622483 UBIAD1Q9Y5Z9 338 aa21.94■■□□□ 1.1
PCSK6-220ENST00000622483 PFDN6O15212 129 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 C8BP07358 591 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 SLC4A11Q8NBS3 891 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 CERS2Q96G23 380 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 NOL6Q9H6R4 1146 aaKnown RBP21.93■■□□□ 1.1
PCSK6-220ENST00000622483 CACNA2D2Q9NY47 1150 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 VPS28Q9UK41 221 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 PCDHGA3Q9Y5H0 932 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 COL2A1P02458 1487 aaPredicted RBP21.93■■□□□ 1.1
PCSK6-220ENST00000622483 KPNA4O00629 521 aaPredicted RBP21.93■■□□□ 1.1
PCSK6-220ENST00000622483 CLPXO76031 633 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 MICAL2O94851 1124 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 ATG7O95352 703 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 PSMB4P28070 264 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 SPCS2Q15005 226 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 PYROXD2Q8N2H3 581 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 CCNYQ8ND76 341 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 PSD4Q8NDX1 1056 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 OR52K1Q8NGK4 314 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 TPH1P17752 444 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 MZF1P28698 734 aaPredicted RBP21.93■■□□□ 1.1
PCSK6-220ENST00000622483 ASPAP45381 313 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 PLK1P53350 603 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 CAPRIN1Q14444 709 aaKnown RBP21.93■■□□□ 1.1
PCSK6-220ENST00000622483 INAVAQ3KP66 663 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 STXBP5Q5T5C0 1151 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 TTC30AQ86WT1 665 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 TP53INP2Q8IXH6 220 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 EXOC8Q8IYI6 725 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 SNX19Q92543 992 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 SMARCAD1Q9H4L7 1026 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 OXSMQ9NWU1 459 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 TRAF6Q9Y4K3 522 aa21.93■■□□□ 1.1
PCSK6-220ENST00000622483 SYNJ2BP-COX16A0A087WUM0 186 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 GARSP41250 739 aaKnown RBP21.92■■□□□ 1.1
PCSK6-220ENST00000622483 FAM117BQ6P1L5 589 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 FAM183BPQ6ZVS7 135 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 PDZD8Q8NEN9 1154 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 ABHD11Q8NFV4 315 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 HMGCLL1Q8TB92 370 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 SREK1Q8WXA9 508 aaKnown RBP21.92■■□□□ 1.1
PCSK6-220ENST00000622483 HTRA1Q92743 480 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 HEXIM2Q96MH2 286 aaKnown RBP21.92■■□□□ 1.1
PCSK6-220ENST00000622483 MIR1-1HGQ9H1L0 117 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 TXNRD2Q9NNW7 524 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 COX16Q9P0S2 106 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 IFT80Q9P2H3 777 aaPredicted RBP21.92■■□□□ 1.1
PCSK6-220ENST00000622483 IPO11Q9UI26 975 aaKnown RBP21.92■■□□□ 1.1
PCSK6-220ENST00000622483 GLTPD2A6NH11 291 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 SNAP91O60641 907 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 CYP3A5P20815 502 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 ZNF143P52747 638 aaPredicted RBP21.92■■□□□ 1.1
PCSK6-220ENST00000622483 FASTKQ14296 549 aaKnown RBP21.92■■□□□ 1.1
PCSK6-220ENST00000622483 NEPROQ6NW34 567 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 ITPKCQ96DU7 683 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 BEGAINQ9BUH8 593 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 B3GNT5Q9BYG0 378 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 FBRSL1Q9HCM7 1045 aaKnown RBP21.92■■□□□ 1.1
PCSK6-220ENST00000622483 ATP11BQ9Y2G3 1177 aa21.92■■□□□ 1.1
PCSK6-220ENST00000622483 BCLAF3A2AJT9 711 aaKnown RBP21.91■■□□□ 1.1
PCSK6-220ENST00000622483 AXIN1O15169 862 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 SYNCRIPO60506 623 aaKnown RBP21.91■■□□□ 1.1
PCSK6-220ENST00000622483 TADA2AO75478 443 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 MTHFD1P11586 935 aaKnown RBP21.91■■□□□ 1.1
PCSK6-220ENST00000622483 CHRM3P20309 590 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 S100A1P23297 94 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 LRPAP1P30533 357 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 SHCBP1Q8NEM2 672 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 TNIP2Q8NFZ5 429 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 LHPPQ9H008 270 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 UPF3AQ9H1J1 476 aaKnown RBP21.91■■□□□ 1.1
PCSK6-220ENST00000622483 VTA1Q9NP79 307 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 SPAG4Q9NPE6 437 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.91■■□□□ 1.1
PCSK6-220ENST00000622483 RUVBL2Q9Y230 463 aaKnown RBP21.91■■□□□ 1.1
PCSK6-220ENST00000622483 MRASO14807 208 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 AURKAO14965 403 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 EMC2Q15006 297 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 OXA1LQ15070 435 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 PGM5Q15124 567 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 CATSPERGQ6ZRH7 1159 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 SCUBE3Q8IX30 993 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 LSMEM2Q8N112 164 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 C12orf29Q8N999 325 aa21.91■■□□□ 1.1
PCSK6-220ENST00000622483 UNC93B1Q9H1C4 597 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms