RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 ARHGAP42A6NI28 874 aa25.56■■□□□ 1.68
VEGFA-229ENST00000621747 A6NNZ2 444 aa25.56■■□□□ 1.68
VEGFA-229ENST00000621747 ENC1O14682 589 aa25.56■■□□□ 1.68
VEGFA-229ENST00000621747 LRCH4O75427 683 aa25.56■■□□□ 1.68
VEGFA-229ENST00000621747 ABL2P42684 1182 aa25.56■■□□□ 1.68
VEGFA-229ENST00000621747 SGCGQ13326 291 aa25.56■■□□□ 1.68
VEGFA-229ENST00000621747 ACAP1Q15027 740 aa25.56■■□□□ 1.68
VEGFA-229ENST00000621747 CCNI2Q6ZMN8 369 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-229ENST00000621747 GCNT7Q6ZNI0 430 aa25.56■■□□□ 1.68
VEGFA-229ENST00000621747 OR13H1Q8NG92 308 aa25.56■■□□□ 1.68
VEGFA-229ENST00000621747 CPLX3Q8WVH0 158 aa25.56■■□□□ 1.68
VEGFA-229ENST00000621747 CELF6Q96J87 481 aaKnown RBP25.56■■□□□ 1.68
VEGFA-229ENST00000621747 KLHL11Q9NVR0 708 aa25.56■■□□□ 1.68
VEGFA-229ENST00000621747 IFNKQ9P0W0 207 aa25.56■■□□□ 1.68
VEGFA-229ENST00000621747 LUC7L2Q9Y383 392 aaKnown RBP25.56■■□□□ 1.68
VEGFA-229ENST00000621747 COL5A1P20908 1838 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-229ENST00000621747 KNL1Q8NG31 2342 aa25.55■■□□□ 1.68
VEGFA-229ENST00000621747 PAK4O96013 591 aaPredicted RBP25.55■■□□□ 1.68
VEGFA-229ENST00000621747 PCK1P35558 622 aa25.55■■□□□ 1.68
VEGFA-229ENST00000621747 CLDN2P57739 230 aa25.55■■□□□ 1.68
VEGFA-229ENST00000621747 SKOR2Q2VWA4 1001 aaPredicted RBP25.55■■□□□ 1.68
VEGFA-229ENST00000621747 CCDC157Q569K6 752 aa25.55■■□□□ 1.68
VEGFA-229ENST00000621747 PPP6R3Q5H9R7 873 aaPredicted RBP25.55■■□□□ 1.68
VEGFA-229ENST00000621747 TMPRSS7Q7RTY8 843 aa25.55■■□□□ 1.68
VEGFA-229ENST00000621747 PTAR1Q7Z6K3 402 aaPredicted RBP25.55■■□□□ 1.68
VEGFA-229ENST00000621747 TTC7BQ86TV6 843 aa25.55■■□□□ 1.68
VEGFA-229ENST00000621747 DCP2Q8IU60 420 aaKnown RBP25.55■■□□□ 1.68
VEGFA-229ENST00000621747 GALNT15Q8N3T1 639 aa25.55■■□□□ 1.68
VEGFA-229ENST00000621747 ZCCHC14Q8WYQ9 949 aaKnown RBP25.55■■□□□ 1.68
VEGFA-229ENST00000621747 LHX3Q9UBR4 397 aa25.55■■□□□ 1.68
VEGFA-229ENST00000621747 ZMIZ1Q9ULJ6 1067 aa25.55■■□□□ 1.68
VEGFA-229ENST00000621747 CABIN1Q9Y6J0 2220 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 PRAMEF11O60813 436 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 KRT37O76014 449 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 TPM3P06753 285 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 ERCC2P18074 760 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 FGL2Q14314 439 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 GRM3Q14832 879 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 CYTH1Q15438 398 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 KYAT3Q6YP21 454 aaKnown RBP25.54■■□□□ 1.68
VEGFA-229ENST00000621747 CYP4V2Q6ZWL3 525 aaPredicted RBP25.54■■□□□ 1.68
VEGFA-229ENST00000621747 KANSL1Q7Z3B3 1105 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 NETO2Q8NC67 525 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 VOPP1Q96AW1 172 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 LENG8Q96PV6 779 aaPredicted RBP25.54■■□□□ 1.68
VEGFA-229ENST00000621747 CPEB1Q9BZB8 566 aaKnown RBP25.54■■□□□ 1.68
VEGFA-229ENST00000621747 SLC39A8Q9C0K1 460 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 ZWILCHQ9H900 591 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 PDFQ9HBH1 243 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 DKK3Q9UBP4 350 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 PCDHGA1Q9Y5H4 931 aa25.54■■□□□ 1.68
VEGFA-229ENST00000621747 MAP1BP46821 2468 aaKnown RBP25.53■■□□□ 1.68
VEGFA-229ENST00000621747 IGLON5A6NGN9 336 aa25.53■■□□□ 1.68
VEGFA-229ENST00000621747 SDC3O75056 442 aa25.53■■□□□ 1.68
VEGFA-229ENST00000621747 HCAR3P49019 387 aa25.53■■□□□ 1.68
VEGFA-229ENST00000621747 PAPOLAP51003 745 aaKnown RBP25.53■■□□□ 1.68
VEGFA-229ENST00000621747 Q6ZSR6 202 aa25.53■■□□□ 1.68
VEGFA-229ENST00000621747 ASB12Q8WXK4 309 aa25.53■■□□□ 1.68
VEGFA-229ENST00000621747 IFT43Q96FT9 208 aa25.53■■□□□ 1.68
VEGFA-229ENST00000621747 EXOC2Q96KP1 924 aa25.53■■□□□ 1.68
VEGFA-229ENST00000621747 C1QTNF2Q9BXJ5 285 aa25.53■■□□□ 1.68
VEGFA-229ENST00000621747 ITM2BQ9Y287 266 aa25.53■■□□□ 1.68
VEGFA-229ENST00000621747 J3KR12 359 aa25.52■■□□□ 1.68
VEGFA-229ENST00000621747 FPGTO14772 594 aa25.52■■□□□ 1.68
VEGFA-229ENST00000621747 AREL1O15033 823 aa25.52■■□□□ 1.68
VEGFA-229ENST00000621747 C1SP09871 688 aa25.52■■□□□ 1.68
VEGFA-229ENST00000621747 CDK4P11802 303 aa25.52■■□□□ 1.68
VEGFA-229ENST00000621747 RABIFP47224 123 aa25.52■■□□□ 1.68
VEGFA-229ENST00000621747 PIGHQ14442 188 aaPredicted RBP25.52■■□□□ 1.68
VEGFA-229ENST00000621747 BOLA3Q53S33 107 aa25.52■■□□□ 1.68
VEGFA-229ENST00000621747 DENND6BQ8NEG7 585 aa25.52■■□□□ 1.68
VEGFA-229ENST00000621747 BMFQ96LC9 184 aa25.52■■□□□ 1.68
VEGFA-229ENST00000621747 THAP2Q9H0W7 228 aa25.52■■□□□ 1.68
VEGFA-229ENST00000621747 GGT7Q9UJ14 662 aa25.52■■□□□ 1.68
VEGFA-229ENST00000621747 FRYQ5TBA9 3013 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 DOCK9Q9BZ29 2069 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 ASPMQ8IZT6 3477 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 H3BRJ5 948 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 RAD51BO15315 384 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 GYPCP04921 128 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 XPAP23025 273 aaPredicted RBP25.51■■□□□ 1.67
VEGFA-229ENST00000621747 SUOXP51687 545 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 NFKBIBQ15653 356 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 HS1BP3Q53T59 392 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 AFMIDQ63HM1 303 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 SLC22A18ASQ8N1D0 253 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 LZTR1Q8N653 840 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 HCAR2Q8TDS4 363 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 CXorf40AQ8TE69 158 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 SP110Q9HB58 689 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 CWC15Q9P013 229 aaKnown RBP25.51■■□□□ 1.67
VEGFA-229ENST00000621747 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.51■■□□□ 1.675e-11■■■□□ 15.1
VEGFA-229ENST00000621747 EPG5Q9HCE0 2579 aa25.51■■□□□ 1.67
VEGFA-229ENST00000621747 CEP295Q9C0D2 2601 aa25.5■■□□□ 1.67
VEGFA-229ENST00000621747 POM121BA6NF01 834 aa25.5■■□□□ 1.67
VEGFA-229ENST00000621747 DFFAO00273 331 aa25.5■■□□□ 1.67
VEGFA-229ENST00000621747 INSIG1O15503 277 aa25.5■■□□□ 1.67
VEGFA-229ENST00000621747 SPINT1O43278 529 aa25.5■■□□□ 1.67
VEGFA-229ENST00000621747 RFPL3O75679 317 aa25.5■■□□□ 1.67
VEGFA-229ENST00000621747 PALMO75781 387 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms