RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 SNX8Q9Y5X2 465 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 ZNF646O15015 1829 aaPredicted RBP8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 COL11A1P12107 1806 aaPredicted RBP8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 ARID2Q68CP9 1835 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 F8W810 466 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 FZD9O00144 591 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 CLASP2O75122 1294 aaKnown RBP8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 TGDSO95455 350 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 DHRS4L1P0CG22 281 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 CTSEP14091 401 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 ACADSP16219 412 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 TSHRP16473 764 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 TNNI3P19429 210 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 RENBPP51606 427 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 MBTD1Q05BQ5 628 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 BCL2L1Q07817 233 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 TAF10Q12962 218 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 ITGA9Q13797 1035 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 PGS1Q32NB8 556 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 LRRC73Q5JTD7 316 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 CAND1Q86VP6 1230 aaKnown RBP8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 TMPRSS6Q8IU80 811 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 TBC1D19Q8N5T2 526 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 CEP70Q8NHQ1 597 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 MTBPQ96DY7 904 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 MRPL9Q9BYD2 267 aaKnown RBP8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 FZD8Q9H461 694 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 PRDM12Q9H4Q4 367 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 BRD9Q9H8M2 597 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 KCNK4Q9NYG8 393 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 TNFSF13BQ9Y275 285 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 CCL22O00626 93 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 LINGO3P0C6S8 592 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 NPR3P17342 541 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 SMPD1P17405 629 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 POLR2EP19388 210 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 EEF1DP29692 281 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 PDK2Q15119 407 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 AP5B1Q2VPB7 878 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 ALFQ53S48 1182 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 FBXO48Q5FWF7 155 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 ZNF410Q86VK4 478 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 TMEM159Q96B96 161 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 ZNF333Q96JL9 665 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 ZFYVE19Q96K21 471 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 MRPL45Q9BRJ2 306 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 C17orf80Q9BSJ5 609 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 ADGRE3Q9BY15 652 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 COPS7BQ9H9Q2 264 aaPredicted RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 TXNRD2Q9NNW7 524 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 EXOSC4Q9NPD3 245 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 ANGPTL2Q9UKU9 493 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 GTF2A1LQ9UNN4 478 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 ACOT9Q9Y305 439 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 PRKAB1Q9Y478 270 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 SMIM28A0A1B0GU29 152 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 TBL1XO60907 577 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 ZCCHC18P0CG32 403 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 CD86P42081 329 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 MRPS5P82675 430 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 SLC6A3Q01959 620 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 NR6A1Q15406 480 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 INSCQ1MX18 579 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 RIPOR1Q6ZS17 1223 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 PQLC3Q8N755 202 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 NRG4Q8WWG1 115 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 HTR3CQ8WXA8 447 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 SMG7Q92540 1137 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 RPL10LQ96L21 214 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 ECSITQ9BQ95 431 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 MRPL1Q9BYD6 325 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 LRRC40Q9H9A6 602 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 EML4Q9HC35 981 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 RBPJLQ9UBG7 517 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 LRCH1Q9Y2L9 728 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 AAR2Q9Y312 384 aaKnown RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 EVPLQ92817 2033 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 IQCF5A8MTL0 148 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 USP1O94782 785 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 FBXO21O94952 628 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 NTRK1P04629 796 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 GOT1P17174 413 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 CYP3A5P20815 502 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 PRKAG1P54619 331 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 CBX2Q14781 532 aaPredicted RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 KRT72Q14CN4 511 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 TAZQ16635 292 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 SLC10A6Q3KNW5 377 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 CNSTQ6PJW8 725 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 PRSS55Q6UWB4 352 aaPredicted RBP8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 GLT6D1Q7Z4J2 308 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 OR52K1Q8NGK4 314 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 ELMO1Q92556 727 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 MAML3Q96JK9 1138 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 SERPINB11Q96P15 392 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 SEMA3CQ99985 751 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 HTATIP2Q9BUP3 242 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 NRDE2Q9H7Z3 1164 aa8.36□□□□□ -1.07
PTPDC1-204ENST00000620992 NDE1Q9NXR1 346 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms