RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 INPP1P49441 399 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 NIPAL4Q0D2K0 466 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 GRIK4Q16099 956 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 FGD3Q5JSP0 725 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 ZPBP2Q6X784 338 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 TIFABQ6ZNK6 161 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 NT5DC4Q86YG4 428 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 SLC41A1Q8IVJ1 513 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF567Q8N184 647 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 CBR4Q8N4T8 237 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 CATSPER1Q8NEC5 780 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 ACMSDQ8TDX5 336 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 GIPC2Q8TF65 315 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 EGFL8Q99944 293 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 STN1Q9H668 368 aaKnown RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 OLAHQ9NV23 265 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 VANGL2Q9ULK5 521 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 MAFBQ9Y5Q3 323 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 GREB1LQ9C091 1923 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 PRORSD1PA6NEY8 169 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 SOCS2O14508 198 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 AP1G1O43747 822 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 ZFXP17010 805 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 ACAT1P24752 427 aaKnown RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 VARSP26640 1264 aaKnown RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 TSPY1Q01534 308 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 SLC6A3Q01959 620 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 CD300CQ08708 224 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 CCDC153Q494R4 210 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 NCBP2-AS2Q69YL0 99 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 ZFP1Q6P2D0 407 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 SZRD1Q7Z422 152 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 ERI1Q8IV48 349 aaKnown RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 DENND6AQ8IWF6 608 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 PGAM4Q8N0Y7 254 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 FSTL5Q8N475 847 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 TMEM102Q8N9M5 508 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 NXNL1Q96CM4 212 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 RMDN1Q96DB5 314 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 TBCBQ99426 244 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 MRPL45Q9BRJ2 306 aaKnown RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 FTHL17Q9BXU8 183 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 DPEP3Q9H4B8 488 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 EPB41L1Q9H4G0 881 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 FBRSL1Q9HCM7 1045 aaKnown RBP7.03□□□□□ -1.28
NEDD9-216ENST00000620854 MKS1Q9NXB0 559 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 XPR1Q9UBH6 696 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 GIMAP2Q9UG22 337 aa7.03□□□□□ -1.28
NEDD9-216ENST00000620854 C1orf232A0A0U1RR37 186 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 ANGPT2O15123 496 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 GRID2O43424 1007 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 PMPCBO75439 489 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 BCAS2O75934 225 aaPredicted RBP7.02□□□□□ -1.28
NEDD9-216ENST00000620854 KCNH1O95259 989 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 ZBTB11O95625 1053 aaPredicted RBP7.02□□□□□ -1.28
NEDD9-216ENST00000620854 HMBSP08397 361 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 COL6A2P12110 1019 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 MAGEA3P43357 314 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 TRAF2Q12933 501 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 SEMA5AQ13591 1074 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 GJC2Q5T442 439 aaPredicted RBP7.02□□□□□ -1.28
NEDD9-216ENST00000620854 CTU1Q7Z7A3 348 aaKnown RBP7.02□□□□□ -1.28
NEDD9-216ENST00000620854 KCNMB4Q86W47 210 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 SMYD1Q8NB12 490 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 SLC7A14Q8TBB6 771 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.02□□□□□ -1.28
NEDD9-216ENST00000620854 ELMO2Q96JJ3 720 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 ZBTB18Q99592 522 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 OSMRQ99650 979 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 PLEKHA5Q9HAU0 1116 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 BARX2Q9UMQ3 279 aaPredicted RBP7.02□□□□□ -1.28
NEDD9-216ENST00000620854 PRPF19Q9UMS4 504 aaKnown RBP7.02□□□□□ -1.28
NEDD9-216ENST00000620854 TRIM17Q9Y577 477 aa7.02□□□□□ -1.28
NEDD9-216ENST00000620854 TRIM43BA6NCK2 446 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 SYNDIG1LA6NDD5 238 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 TCAF2A6NFQ2 919 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 E5RI56 91 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 B4GAT1O43505 415 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 ATE1O95260 518 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 PIGRP01833 764 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 ATP5BP06576 529 aaKnown RBP7.02□□□□□ -1.29
NEDD9-216ENST00000620854 PFKMP08237 780 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 ZNF182P17025 639 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-216ENST00000620854 TPSB2P20231 275 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 CD247P20963 164 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 IL10P22301 178 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 NMBRP28336 390 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 SLC7A2P52569 658 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 GNA12Q03113 381 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 ITGADQ13349 1161 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 TRIM25Q14258 630 aaKnown RBP7.02□□□□□ -1.29
NEDD9-216ENST00000620854 POU6F1Q14863 301 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 TPSAB1Q15661 275 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 FSCN1Q16658 493 aaKnown RBP7.02□□□□□ -1.29
NEDD9-216ENST00000620854 IMPG1Q17R60 797 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 FBXO48Q5FWF7 155 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 PRAMEF19Q5SWL8 479 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 GLB1LQ6UWU2 654 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 OLFML1Q6UWY5 402 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms