RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 DUX4Q9UBX2 424 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 CDC14AQ9UNH5 594 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 INO80Q9ULG1 1556 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 GSTM5P46439 218 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 IL18Q14116 193 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 SYT16Q17RD7 645 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 KIAA0408Q6ZU52 694 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 EFHBQ8N7U6 833 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 ADCY4Q8NFM4 1077 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 VANGL1Q8TAA9 524 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 SNX4O95219 450 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 PPP2R2BQ00005 443 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 CACHD1Q5VU97 1274 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 GALNT7Q86SF2 657 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF431Q8TF32 576 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 TMEM203Q969S6 136 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 PURBQ96QR8 312 aaKnown RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 CHRAC1Q9NRG0 131 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 SPASTQ9UBP0 616 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 AJAP1Q9UKB5 411 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 MFHAS1Q9Y4C4 1052 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 OVOS2A0A0G2JMS6 1433 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 NUP153P49790 1475 aaKnown RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 WTIPA6NIX2 430 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 FUCA1P04066 466 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 IFNA16P05015 189 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 AMIGO1Q86WK6 493 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 CERKQ8TCT0 537 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 CDH9Q9ULB4 789 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 TRIM32Q13049 653 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 MGAT5BQ3V5L5 792 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF568Q3ZCX4 644 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 RUNDC3AQ59EK9 446 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 ADI1Q9BV57 179 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 MMP28Q9H239 520 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 FAIMQ9NVQ4 179 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 USP18Q9UMW8 372 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 TMEM233B4DJY2 109 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 H3BN98 237 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 H3BNX3 289 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 hCG_2039718K7EN88 272 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 COL6A2P12110 1019 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 CASP9P55211 416 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 MEP1AQ16819 746 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 FAM117BQ6P1L5 589 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 FAM92BQ6ZTR7 304 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 ALLCQ8N6M5 410 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 FAM120BQ96EK7 910 aaKnown RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 PTCD3Q96EY7 689 aaKnown RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 NSMCE2Q96MF7 247 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 SQORQ9Y6N5 450 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 C2orf74A8MZ97 194 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 KCNK1O00180 336 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 MAGEC1O60732 1142 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 ILF2Q12905 390 aaKnown RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 EFHC2Q5JST6 749 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 TTLL6Q8N841 843 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 BEST2Q8NFU1 509 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 OR2T34Q8NGX1 318 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 OR2T3Q8NH03 318 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 BPIFB1Q8TDL5 484 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 TBCCD1Q9NVR7 557 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 AGO2Q9UKV8 859 aaKnown RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 PAPSS1O43252 624 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 RGS10O43665 173 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 CHRNGP07510 517 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 RFX3P48380 749 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 GRIK4Q16099 956 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 DEF8Q6ZN54 512 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 SLC34A3Q8N130 599 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 RASSF5Q8WWW0 418 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 CDHR5Q9HBB8 845 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 ABCA5Q8WWZ7 1642 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF804BA4D1E1 1349 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 BPGMP07738 259 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 NRLP54845 237 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 BST2Q10589 180 aaKnown RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 FGL2Q14314 439 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 CYP27C1Q4G0S4 372 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 SPATC1Q76KD6 591 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 KBTBD8Q8NFY9 601 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 PABPC5Q96DU9 382 aaKnown RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 IL37Q9NZH6 218 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 CRYL1Q9Y2S2 319 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 SAMHD1Q9Y3Z3 626 aaKnown RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 SNAP91O60641 907 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 MSL3P1P0C860 447 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 NAE1Q13564 534 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 MED22Q15528 200 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 TSNQ15631 228 aaKnown RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF648Q5T619 568 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 SUSD4Q5VX71 490 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 CLEC6AQ6EIG7 209 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 C1GALT1C1Q96EU7 318 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 REXO5Q96IC2 774 aaKnown RBP5.08□□□□□ -1.6
VPS13D-214ENST00000620676 NECTIN4Q96NY8 510 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 PPCSQ9HAB8 311 aa5.08□□□□□ -1.6
VPS13D-214ENST00000620676 ITGA11Q9UKX5 1188 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms