RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 RBM47A0AV96 593 aaKnown RBP20.62■□□□□ 0.89
NEK3-208ENST00000618534 XPOTO43592 962 aaKnown RBP20.62■□□□□ 0.89
NEK3-208ENST00000618534 CSPG5O95196 566 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 PSMC3P17980 439 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 ARNTP27540 789 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 USP46P62068 366 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 ARL13BQ3SXY8 428 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 PCID2Q5JVF3 399 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 TRIM67Q6ZTA4 783 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 CNTN4Q8IWV2 1026 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 DDI1Q8WTU0 396 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 EDEM1Q92611 657 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 ELMO2Q96JJ3 720 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 KATNBL1Q9H079 304 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 UTP6Q9NYH9 597 aaKnown RBP20.62■□□□□ 0.89
NEK3-208ENST00000618534 NCKIPSDQ9NZQ3 722 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 SUCOQ9UBS9 1254 aaKnown RBP20.62■□□□□ 0.89
NEK3-208ENST00000618534 SLC2A6Q9UGQ3 507 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 CNOT11Q9UKZ1 510 aaKnown RBP20.62■□□□□ 0.89
NEK3-208ENST00000618534 RNF11Q9Y3C5 154 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 HDCP19113 662 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 FGFR3P22607 806 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 PCSK6P29122 969 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 SLC1A2P43004 574 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 GJA9P57773 515 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 TAS2R39P59534 338 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 SULT2A1Q06520 285 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 TRIM25Q14258 630 aaKnown RBP20.62■□□□□ 0.89
NEK3-208ENST00000618534 CYTH1Q15438 398 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 ZNF280DQ6N043 979 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 ARHGAP36Q6ZRI8 547 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 IPMKQ8NFU5 416 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 HEXDCQ8WVB3 486 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 TMEM40Q8WWA1 233 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 TBL1YQ9BQ87 522 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 TKTL2Q9H0I9 626 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 COQ10BQ9H8M1 238 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 TRPC7Q9HCX4 862 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 CRTAC1Q9NQ79 661 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 TMEM30AQ9NV96 361 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 AP4S1Q9Y587 144 aa20.62■□□□□ 0.89
NEK3-208ENST00000618534 PYGLP06737 847 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 C8BP07358 591 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 DNAJB1P25685 340 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 ARCN1P48444 511 aaKnown RBP20.61■□□□□ 0.89
NEK3-208ENST00000618534 NR1H2P55055 460 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 RALGDSQ12967 914 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 PIWIL4Q7Z3Z4 852 aaKnown RBP20.61■□□□□ 0.89
NEK3-208ENST00000618534 GPC2Q8N158 579 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 ARRDC4Q8NCT1 418 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 LRTOMTQ8WZ04 291 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 SMOQ99835 787 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 TNFRSF12AQ9NP84 129 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 CACNG4Q9UBN1 327 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 MYLKQ15746 1914 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 AP3B1O00203 1094 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 HNRNPRO43390 633 aaKnown RBP20.61■□□□□ 0.89
NEK3-208ENST00000618534 CAPN15O75808 1086 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 SMPD1P17405 629 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 BAG6P46379 1132 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 XKR4Q5GH76 650 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 SPPL2BQ8TCT7 592 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 ZNF419Q96HQ0 510 aaPredicted RBP20.61■□□□□ 0.89
NEK3-208ENST00000618534 WDCPQ9H6R7 721 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 CYP4F12Q9HCS2 524 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 CACNA2D2Q9NY47 1150 aa20.61■□□□□ 0.89
NEK3-208ENST00000618534 ARHGAP10A1A4S6 786 aa20.6■□□□□ 0.89
NEK3-208ENST00000618534 H3BSA7 217 aa20.6■□□□□ 0.89
NEK3-208ENST00000618534 FBP2O00757 339 aa20.6■□□□□ 0.89
NEK3-208ENST00000618534 SLC5A2P31639 672 aa20.6■□□□□ 0.89
NEK3-208ENST00000618534 REP15Q6BDI9 236 aa20.6■□□□□ 0.89
NEK3-208ENST00000618534 RPS27LQ71UM5 84 aaKnown RBP20.6■□□□□ 0.89
NEK3-208ENST00000618534 SNX31Q8N9S9 440 aa20.6■□□□□ 0.89
NEK3-208ENST00000618534 SHCBP1Q8NEM2 672 aa20.6■□□□□ 0.89
NEK3-208ENST00000618534 ZMIZ2Q8NF64 920 aa20.6■□□□□ 0.89
NEK3-208ENST00000618534 PGAP3Q96FM1 320 aaPredicted RBP20.6■□□□□ 0.89
NEK3-208ENST00000618534 MRPL57Q9BQC6 102 aaKnown RBP20.6■□□□□ 0.89
NEK3-208ENST00000618534 UNC93B1Q9H1C4 597 aa20.6■□□□□ 0.89
NEK3-208ENST00000618534 PADI4Q9UM07 663 aa20.6■□□□□ 0.89
NEK3-208ENST00000618534 SNAI1O95863 264 aaPredicted RBP20.59■□□□□ 0.89
NEK3-208ENST00000618534 DNAJB2P25686 324 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 PSMD8P48556 350 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 LRP8Q14114 963 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 PPP1R3AQ16821 1122 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 TBC1D25Q3MII6 688 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 UBXN11Q5T124 520 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 FAM219BQ5XKK7 198 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 BORAQ6PGQ7 559 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 CHSY3Q70JA7 882 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 ANKRD13AQ8IZ07 590 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 ZNF597Q96LX8 424 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 FICDQ9BVA6 458 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 PREBQ9HCU5 417 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 CEPT1Q9Y6K0 416 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 TLL2Q9Y6L7 1015 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 ZNF236Q9UL36 1845 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 BTBD19C9JJ37 291 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 DFFAO00273 331 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 TRIM24O15164 1050 aa20.59■□□□□ 0.89
NEK3-208ENST00000618534 PSMD3O43242 534 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms