RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 GPR34Q9UPC5 381 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 PLAAQ9Y263 795 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 CA5BQ9Y2D0 317 aa4.65□□□□□ -1.66
SNCA-213ENST00000618500 ILVBLA1L0T0 632 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 POM121BA6NF01 834 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 PRR19A6NJB7 356 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 CLIC2O15247 247 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 ZMPSTE24O75844 475 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 AGFG2O95081 481 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 MAP3K6O95382 1288 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 PDIA4P13667 645 aaKnown RBP4.65□□□□□ -1.67
SNCA-213ENST00000618500 PDGFRAP16234 1089 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 PRLRP16471 622 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 ETFBP38117 255 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 LEPRP48357 1165 aaKnown RBP4.65□□□□□ -1.67
SNCA-213ENST00000618500 CASP4P49662 377 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 EPHA4P54764 986 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 CLDN2P57739 230 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 GPLD1P80108 840 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 CUL2Q13617 745 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 GRM3Q14832 879 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 TGIF1Q15583 401 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 ZNF805Q5CZA5 627 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 TPRG1LQ5T0D9 272 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 MCTP1Q6DN14 999 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 SPOPLQ6IQ16 392 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 WDR74Q6RFH5 385 aaPredicted RBP4.65□□□□□ -1.67
SNCA-213ENST00000618500 SPNS3Q6ZMD2 512 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 Q6ZVU0 165 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 PARS2Q7L3T8 475 aaKnown RBP4.65□□□□□ -1.67
SNCA-213ENST00000618500 RAVER1Q8IY67 606 aaKnown RBP4.65□□□□□ -1.67
SNCA-213ENST00000618500 ESX1Q8N693 406 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 AGAP3Q96P47 875 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 BARD1Q99728 777 aaKnown RBP4.65□□□□□ -1.67
SNCA-213ENST00000618500 HEPHQ9BQS7 1158 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 ZSCAN16Q9H4T2 348 aaPredicted RBP4.65□□□□□ -1.67
SNCA-213ENST00000618500 ZNF768Q9H5H4 540 aaKnown RBP4.65□□□□□ -1.67
SNCA-213ENST00000618500 RUBCNLQ9H714 662 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 UCK1Q9HA47 277 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 TMEM63CQ9P1W3 806 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 ZNF212Q9UDV6 495 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 IPO11Q9UI26 975 aaKnown RBP4.65□□□□□ -1.67
SNCA-213ENST00000618500 PILRAQ9UKJ1 303 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 KCNMB2Q9Y691 235 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 CLIC4Q9Y696 253 aa4.65□□□□□ -1.67
SNCA-213ENST00000618500 IGHV5-10-1A0A0J9YXX1 117 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 TOX3O15405 576 aaPredicted RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 SLC31A1O15431 190 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 HNRNPRO43390 633 aaKnown RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 KLHL41O60662 606 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 DTNBO60941 627 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 YEATS4O95619 227 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 TNFP01375 233 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 VAV1P15498 845 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 TSHRP16473 764 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 SGCGQ13326 291 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 CUL4AQ13619 759 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 RAPGEF1Q13905 1077 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 TESK1Q15569 626 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 ALG11Q2TAA5 492 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 ZCWPW2Q504Y3 356 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 CARD16Q5EG05 197 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 DCAF12Q5T6F0 453 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 SPECC1LQ69YQ0 1117 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 CYB5D1Q6P9G0 228 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 CEACAM20Q6UY09 585 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 BNIPLQ7Z465 357 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 TMEM110Q86TL2 294 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 SKAP1Q86WV1 359 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 CHSY1Q86X52 802 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 FAM186BQ8IYM0 893 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 AGBL5Q8NDL9 886 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 FBXL13Q8NEE6 735 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 KIAA1524Q8TCG1 905 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 TAS1R2Q8TE23 839 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 SCARF2Q96GP6 870 aaPredicted RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 ABHD17AQ96GS6 310 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 MED15Q96RN5 788 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 CPEB1Q9BZB8 566 aaKnown RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 GTPBP4Q9BZE4 634 aaKnown RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 POPDC2Q9HBU9 364 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 RAB20Q9NX57 234 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 STIM2Q9P246 746 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 PNMA8BQ9ULN7 279 aaPredicted RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 TP53TG5Q9Y2B4 290 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 ZNF451Q9Y4E5 1061 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 RNF215Q9Y6U7 377 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 ZFC3H1O60293 1989 aaKnown RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 NBPF19A0A087WUL8 3843 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 AKAP9Q99996 3911 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 P4HA2O15460 535 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 NEBLO76041 1014 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 FGF3P11487 239 aaPredicted RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 KRT13P13646 458 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 KELP23276 732 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 RPL13P26373 211 aaKnown RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 UGT1A3P35503 534 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 PSMC2P35998 433 aaKnown RBP4.64□□□□□ -1.67
SNCA-213ENST00000618500 PPP3CAQ08209 521 aa4.64□□□□□ -1.67
SNCA-213ENST00000618500 ELP6Q0PNE2 266 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms