RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 GPD2P43304 727 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 NRIP1P48552 1158 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 NOMO3P69849 1222 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 B3GNT6Q6ZMB0 384 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 ANKS3Q6ZW76 656 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 TRPM8Q7Z2W7 1104 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 LILRB4Q8NHJ6 448 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 SLC7A14Q8TBB6 771 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 PBXIP1Q96AQ6 731 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 ZIM3Q96PE6 472 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 CTRCQ99895 268 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 PITHD1Q9GZP4 211 aaPredicted RBP12.24□□□□□ -0.45
SRRT-216ENST00000618262 CHST7Q9NS84 486 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 SLC12A8A0AV02 714 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 MTMR11A4FU01 709 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 H7C0C1 242 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 ENC1O14682 589 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 TGM5O43548 720 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 TMEM127O75204 238 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 M6PRP20645 277 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 HNRNPH3P31942 346 aaKnown RBP12.23□□□□□ -0.45
SRRT-216ENST00000618262 C2orf54Q08AI8 447 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 FAM182AQ5T1J6 154 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 FYB2Q5VWT5 728 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 FAM47EQ6ZV65 393 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 DDX53Q86TM3 631 aaKnown RBP12.23□□□□□ -0.45
SRRT-216ENST00000618262 GIPC3Q8TF64 312 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 KHSRPQ92945 711 aaKnown RBP eCLIP12.23□□□□□ -0.45
SRRT-216ENST00000618262 ACSF2Q96CM8 615 aaPredicted RBP12.23□□□□□ -0.45
SRRT-216ENST00000618262 ARHGEF3Q9NR81 526 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 PCOLCE2Q9UKZ9 415 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 COQ6Q9Y2Z9 468 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 DOCK6Q96HP0 2047 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 CAPN8A6NHC0 703 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 MTSS1O43312 755 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 PIGNO95427 931 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 RCVRNP35243 200 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 PRKCIP41743 596 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 GRIN2CQ14957 1233 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 CNGA2Q16280 664 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 PHKG1Q16816 387 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 CLEC16AQ2KHT3 1053 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 SH3PXD2AQ5TCZ1 1133 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 HFE2Q6ZVN8 426 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 USP43Q70EL4 1123 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 IKBIPQ70UQ0 350 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 CRYBG2Q8N1P7 616 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 SLC35F6Q8N357 371 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 SELENOSQ9BQE4 189 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 RAB17Q9H0T7 212 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 ZNF576Q9H609 170 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 HCFC1R1Q9NWW0 138 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 CNOT8Q9UFF9 292 aaKnown RBP12.23□□□□□ -0.45
SRRT-216ENST00000618262 TBC1D30Q9Y2I9 924 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 GBF1Q92538 1859 aa12.23□□□□□ -0.45
SRRT-216ENST00000618262 CHURC1-FNTBB4DL54 471 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 TMEM189-UBE2V1I3L0A0 370 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 SYN3O14994 580 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 CCL16O15467 120 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 TGDSO95455 350 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 CYP11A1P05108 521 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 CAPN1P07384 714 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 NPR3P17342 541 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 PPM1AP35813 382 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 KRT6CP48668 564 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 BCAP31P51572 246 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 TKTL1P51854 596 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 OTUD4Q01804 1114 aaKnown RBP12.22□□□□□ -0.45
SRRT-216ENST00000618262 FAM102AQ5T9C2 384 aaPredicted RBP12.22□□□□□ -0.45
SRRT-216ENST00000618262 BTBD8Q5XKL5 378 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 EMBQ6PCB8 327 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 UNC93AQ86WB7 457 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 TMEM35BQ8NCS4 154 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 ZNF540Q8NDQ6 660 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 RMDN1Q96DB5 314 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 MCEEQ96PE7 176 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 XPO6Q96QU8 1125 aaKnown RBP12.22□□□□□ -0.45
SRRT-216ENST00000618262 NEURL2Q9BR09 285 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 SYT11Q9BT88 431 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 BTBD2Q9BX70 525 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 BRINP2Q9C0B6 783 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 ZBP1Q9H171 429 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 MRM3Q9HC36 420 aaKnown RBP12.22□□□□□ -0.45
SRRT-216ENST00000618262 NMRK1Q9NWW6 199 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 KCNN3Q9UGI6 736 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 CNTN6Q9UQ52 1028 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 PCDHA11Q9Y5I1 949 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 RAD51BO15315 384 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 MED7O43513 233 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 TBX18O95935 607 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 LYNP07948 512 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 PAEPP09466 180 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 UNGP13051 313 aaPredicted RBP12.22□□□□□ -0.45
SRRT-216ENST00000618262 TFE3P19532 575 aaPredicted RBP12.22□□□□□ -0.45
SRRT-216ENST00000618262 SSTP61278 116 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 FOXK1P85037 733 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 DSG1Q02413 1049 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 LCLAT1Q6UWP7 414 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 TMC5Q6UXY8 1006 aa12.22□□□□□ -0.45
SRRT-216ENST00000618262 ANKRD42Q8N9B4 389 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms