RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	SORCS3	Q9UPU3	1222 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	LOC102724159	A0A0B4J2E5	919 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	TMEM88B	A6NKF7	163 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	MAGEB3	O15480	346 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	PHGDH	O43175	533 aa	Known RBP	7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	MYL9	P24844	172 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	GRM5	P41594	1212 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	ERF	P50548	548 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	RAB2A	P61019	212 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	PWP2	Q15269	919 aa	Known RBP	7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	MIIP	Q5JXC2	388 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	OAF	Q86UD1	273 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	ARMC8	Q8IUR7	673 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	OR10H5	Q8NGA6	315 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	ZNF354B	Q96LW1	612 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	KCNF1	Q9H3M0	494 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	FANCF	Q9NPI8	374 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	KL	Q9UEF7	1012 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	OR12D3	Q9UGF7	316 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	ERVW-1	Q9UQF0	538 aa		7.43	□□□□□ -1.22
PCDH15-231	ENST00000617271	PREX1	Q8TCU6	1659 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	PDE5A	O76074	875 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	TRUB2	O95900	331 aa	Known RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	BCL10	O95999	233 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	IL1B	P01584	269 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	FGF1	P05230	155 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ELFN1	P0C7U0	828 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	HGF	P14210	728 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	KDELR1	P24390	212 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ZNF143	P52747	638 aa	Predicted RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ARFIP1	P53367	373 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MYBPC1	Q00872	1141 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	DPYSL3	Q14195	570 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	XKR6	Q5GH73	641 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	KCNT2	Q6UVM3	1135 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MTDH	Q86UE4	582 aa	Known RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	RBFA	Q8N0V3	343 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	TEX47	Q8TBZ9	253 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ITCH	Q96J02	903 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	SLC9A7	Q96T83	725 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	SEPHS2	Q99611	448 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	NRDE2	Q9H7Z3	1164 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	EXD2	Q9NVH0	621 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	COMMD9	Q9P000	198 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ADAMTS13	Q76LX8	1427 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271		E5RJQ4	531 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	KLHL18	O94889	574 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	NR2F1	P10589	423 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ATP4A	P20648	1035 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ME2	P23368	584 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MIP	P30301	263 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	RPL21	P46778	160 aa	Known RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	POLD2	P49005	469 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	CAMK1	Q14012	370 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	DACT2	Q5SW24	774 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	WSCD1	Q658N2	575 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	CHSY3	Q70JA7	882 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MARK2	Q7KZI7	788 aa	Known RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	DET1	Q7L5Y6	550 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	CXXC5	Q7LFL8	322 aa	Known RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	SMYD1	Q8NB12	490 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	TEKT5	Q96M29	485 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ZNF304	Q9HCX3	659 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	DLGAP2	Q9P1A6	1054 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MTRR	Q9UBK8	725 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MTF2	Q9Y483	593 aa	Predicted RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	HEBP2	Q9Y5Z4	205 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	SELP	P16109	830 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	RCVRN	P35243	200 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	TNK2	Q07912	1038 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	BNIP2	Q12982	314 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MTM1	Q13496	603 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	TRIM40	Q6P9F5	258 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ZDHHC13	Q8IUH4	622 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	C8orf59	Q8N0T1	100 aa	Predicted RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MTFMT	Q96DP5	389 aa	Known RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MAML3	Q96JK9	1138 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	TEFM	Q96QE5	360 aa	Known RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ZNF670	Q9BS34	389 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	BTBD10	Q9BSF8	475 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	CYLD	Q9NQC7	956 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MAT2B	Q9NZL9	334 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MARK1	Q9P0L2	795 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	SMIM35	A0A1B0GVV1	85 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MOXD2P	A6NHM9	499 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	SNPH	O15079	494 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	INPP4B	O15327	924 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ASNA1	O43681	348 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	PCSK2	P16519	638 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	EPOR	P19235	508 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	PNLIPRP1	P54315	467 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	MKRN4P	Q13434	485 aa	Predicted RBP	7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	ATP13A5	Q4VNC0	1218 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	NEPRO	Q6NW34	567 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	FAM183BP	Q6ZVS7	135 aa		7.42	□□□□□ -1.22
PCDH15-231	ENST00000617271	GALNT7	Q86SF2	657 aa		7.42	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms