RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 KLHL32Q96NJ5 620 aa21.09■□□□□ 0.97
TRAPPC3-208ENST00000616074 USP29Q9HBJ7 922 aa21.09■□□□□ 0.97
TRAPPC3-208ENST00000616074 IPO11Q9UI26 975 aaKnown RBP21.09■□□□□ 0.97
TRAPPC3-208ENST00000616074 KALRNO60229 2985 aa21.09■□□□□ 0.97
TRAPPC3-208ENST00000616074 KDELR3O43731 214 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 KRT3P12035 628 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 RFC1P35251 1148 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 NSFP46459 744 aaKnown RBP21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 DUSP3P51452 185 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 GSCP56915 257 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 PFN3P60673 137 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 CCDC173Q0VFZ6 552 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 MYLK3Q32MK0 819 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 LRRC73Q5JTD7 316 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 ZCCHC8Q6NZY4 707 aaKnown RBP21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 PYROXD2Q8N2H3 581 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 DENND6BQ8NEG7 585 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 IFI44Q8TCB0 444 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 ASB12Q8WXK4 309 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 NTAN1Q96AB6 310 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 FCRL3Q96P31 734 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 DEPDC7Q96QD5 511 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 SELENOOQ9BVL4 669 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 OSBPL1AQ9BXW6 950 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 ADAM22Q9P0K1 906 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 SIK3Q9Y2K2 1263 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 CSNK1G3Q9Y6M4 447 aa21.08■□□□□ 0.97
TRAPPC3-208ENST00000616074 AREL1O15033 823 aa21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 AQP9O43315 295 aa21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 TMCC1O94876 653 aa21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 POP4O95707 220 aaKnown RBP21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 MPOP05164 745 aa21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 JUNDP17535 347 aa21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 GPD1P21695 349 aa21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 STAT1P42224 750 aa21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 EIF2B5Q13144 721 aaKnown RBP21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 FKBP15Q5T1M5 1219 aa21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 WDR59Q6PJI9 974 aa21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 ZNF354CQ86Y25 554 aa21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 NETO2Q8NC67 525 aa21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 MAPK15Q8TD08 544 aa21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 NOL6Q9H6R4 1146 aaKnown RBP21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 EVA1BQ9NVM1 165 aa21.07■□□□□ 0.96
TRAPPC3-208ENST00000616074 MGAQ8IWI9 3026 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 LRRK1Q38SD2 2015 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 BUB1O43683 1085 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 USP12O75317 370 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 CSO75390 466 aaKnown RBP21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 TPM2P07951 284 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 IGFALSP35858 605 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 GABREP78334 506 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 TLE3Q04726 772 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 CDKN3Q16667 212 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 CLEC16AQ2KHT3 1053 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 DEFB133Q30KQ1 61 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 GDPD4Q6W3E5 623 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 SLFN11Q7Z7L1 901 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 PHF13Q86YI8 300 aaPredicted RBP21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 SPACA3Q8IXA5 215 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 RBFAQ8N0V3 343 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 RTL3Q8N8U3 475 aaKnown RBP21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 C3orf20Q8ND61 904 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 LMX1AQ8TE12 382 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 CENPTQ96BT3 561 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 ARHGEF26Q96DR7 871 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 GDAP1L1Q96MZ0 367 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 KLC2Q9H0B6 622 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 ABCG4Q9H172 646 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 TCEAL2Q9H3H9 227 aaPredicted RBP21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 PNMA8BQ9ULN7 279 aaPredicted RBP21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 DAAM1Q9Y4D1 1078 aa21.06■□□□□ 0.96
TRAPPC3-208ENST00000616074 ZSCAN5CA6NGD5 496 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC3-208ENST00000616074 CCP110O43303 1012 aa21.05■□□□□ 0.96
TRAPPC3-208ENST00000616074 PRB1P04280 392 aa21.05■□□□□ 0.96
TRAPPC3-208ENST00000616074 CALB1P05937 261 aa21.05■□□□□ 0.96
TRAPPC3-208ENST00000616074 TGM2P21980 687 aa21.05■□□□□ 0.96
TRAPPC3-208ENST00000616074 SYCP1Q15431 976 aa21.05■□□□□ 0.96
TRAPPC3-208ENST00000616074 GUSBP11Q6P575 273 aa21.05■□□□□ 0.96
TRAPPC3-208ENST00000616074 TTC7BQ86TV6 843 aa21.05■□□□□ 0.96
TRAPPC3-208ENST00000616074 VPS36Q86VN1 386 aa21.05■□□□□ 0.96
TRAPPC3-208ENST00000616074 ZNF578Q96N58 590 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC3-208ENST00000616074 TTYH3Q9C0H2 523 aa21.05■□□□□ 0.96
TRAPPC3-208ENST00000616074 FANCLQ9NW38 375 aa21.05■□□□□ 0.96
TRAPPC3-208ENST00000616074 CPED1A4D0V7 1026 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 MMP20O60882 483 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 IGSF6O95976 241 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 ITIH2P19823 946 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 EPHB2P29323 1055 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 THOP1P52888 689 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 COPB1P53618 953 aaKnown RBP21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 RHOAP61586 193 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 EFHC2Q5JST6 749 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 MON1BQ7L1V2 547 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 EFL1Q7Z2Z2 1120 aaKnown RBP21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 ZNF248Q8NDW4 579 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 BTN2A2Q8WVV5 523 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 CASKIN2Q8WXE0 1202 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 HMCESQ96FZ2 354 aa21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 NAF1Q96HR8 494 aaKnown RBP21.04■□□□□ 0.96
TRAPPC3-208ENST00000616074 LGMNQ99538 433 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms