RNA–Protein interactions for RNA: ENST00000614998.4

PER3-209, Transcript of period circadian regulator 3, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene PER3, Length 6,261 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PER3-209	ENST00000614998	TMBIM4	Q9HC24	238 aa		13.36	□□□□□ -0.27
PER3-209	ENST00000614998	PHF11	Q9UIL8	331 aa		13.36	□□□□□ -0.27
PER3-209	ENST00000614998	MAGEC1	O60732	1142 aa		13.36	□□□□□ -0.27
PER3-209	ENST00000614998	FKBP6	O75344	327 aa		13.36	□□□□□ -0.27
PER3-209	ENST00000614998	CCDC166	P0CW27	439 aa		13.36	□□□□□ -0.27
PER3-209	ENST00000614998	NPR3	P17342	541 aa		13.36	□□□□□ -0.27
PER3-209	ENST00000614998	FGFR3	P22607	806 aa		13.36	□□□□□ -0.27
PER3-209	ENST00000614998	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.36	□□□□□ -0.27
PER3-209	ENST00000614998	CPA6	Q8N4T0	437 aa		13.36	□□□□□ -0.27
PER3-209	ENST00000614998	OR6K2	Q8NGY2	324 aa		13.36	□□□□□ -0.27
PER3-209	ENST00000614998	GDPD5	Q8WTR4	605 aa		13.36	□□□□□ -0.27
PER3-209	ENST00000614998	ATXN2	Q99700	1313 aa	Known RBP	13.35	□□□□□ -0.27
PER3-209	ENST00000614998	FAM92A	A1XBS5	289 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	DCX	O43602	365 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	PDE9A	O76083	593 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	MFN2	O95140	757 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	KEL	P23276	732 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	CRADD	P78560	199 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	MYBPC2	Q14324	1141 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	GALNT3	Q14435	633 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	CBX2	Q14781	532 aa	Predicted RBP	13.35	□□□□□ -0.27
PER3-209	ENST00000614998	MPPE1	Q53F39	396 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	EXOC3L1	Q86VI1	746 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.35	□□□□□ -0.27
PER3-209	ENST00000614998	OR6Y1	Q8NGX8	325 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	CDRT15	Q96T59	188 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	NOL6	Q9H6R4	1146 aa	Known RBP	13.35	□□□□□ -0.27
PER3-209	ENST00000614998	KHDRBS3	O75525	346 aa	Known RBP	13.35	□□□□□ -0.27
PER3-209	ENST00000614998	PIGN	O95427	931 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	LTA4H	P09960	611 aa	Known RBP	13.35	□□□□□ -0.27
PER3-209	ENST00000614998	PECAM1	P16284	738 aa	Predicted RBP	13.35	□□□□□ -0.27
PER3-209	ENST00000614998	PCID2	Q5JVF3	399 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	GCNT7	Q6ZNI0	430 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	PMM1	Q92871	262 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	MTMR9	Q96QG7	549 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	NDN	Q99608	321 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	SEMA3C	Q99985	751 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	CAB39L	Q9H9S4	337 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	CD248	Q9HCU0	757 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	STX16-NPEPL1	H3BU86	382 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	STX16	O14662	325 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	MAGEB3	O15480	346 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	MAPT	P10636	758 aa	Known RBP	13.35	□□□□□ -0.27
PER3-209	ENST00000614998	CELF3	Q5SZQ8	465 aa	Known RBP	13.35	□□□□□ -0.27
PER3-209	ENST00000614998	RGMB	Q6NW40	437 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.35	□□□□□ -0.27
PER3-209	ENST00000614998	TNKS2	Q9H2K2	1166 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	FAM86B1	E9PN63	330 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	TPP1	O14773	563 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	ASNA1	O43681	348 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	SLITRK3	O94933	977 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	PTPN4	P29074	926 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	SHMT1	P34896	483 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	FAAP100	Q0VG06	881 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	PARP6	Q2NL67	630 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	LIN54	Q6MZP7	749 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	CYB5D1	Q6P9G0	228 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	DEF8	Q6ZN54	512 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	SLC25A23	Q9BV35	468 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	FNDC11	Q9BVV2	318 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.35	□□□□□ -0.27
PER3-209	ENST00000614998	SLC39A8	Q9C0K1	460 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	DNPEP	Q9ULA0	475 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	CCL16	O15467	120 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	TTPA	P49638	278 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	CASP9	P55211	416 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	RPL38	P63173	70 aa	Known RBP	13.35	□□□□□ -0.27
PER3-209	ENST00000614998	GPR158	Q5T848	1215 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	OLFML2A	Q68BL7	652 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	TRIM63	Q969Q1	353 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
PER3-209	ENST00000614998	IDI2	Q9BXS1	227 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	VPS4A	Q9UN37	437 aa		13.35	□□□□□ -0.27
PER3-209	ENST00000614998	ABCC3	O15438	1527 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	FAM25E	A8MYX2	175 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	SCGN	O76038	276 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	HOXB8	P17481	243 aa	Predicted RBP	13.34	□□□□□ -0.27
PER3-209	ENST00000614998	UBA1	P22314	1058 aa	Known RBP	13.34	□□□□□ -0.27
PER3-209	ENST00000614998	PSMD8	P48556	350 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	PKNOX1	P55347	436 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	NOG	Q13253	232 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	SCIMP	Q6UWF3	145 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	ARPIN	Q7Z6K5	226 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	PSTK	Q8IV42	348 aa	Known RBP	13.34	□□□□□ -0.27
PER3-209	ENST00000614998	ADHFE1	Q8IWW8	467 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	PCDH20	Q8N6Y1	951 aa	Known RBP	13.34	□□□□□ -0.27
PER3-209	ENST00000614998	EHD3	Q9NZN3	535 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	GPC6	Q9Y625	555 aa	Predicted RBP	13.34	□□□□□ -0.27
PER3-209	ENST00000614998		F8VP50	259 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	QSOX1	O00391	747 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	DCLK1	O15075	740 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	ARHGDIB	P52566	201 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	MAX	P61244	160 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	MSLN	Q13421	630 aa	Predicted RBP	13.34	□□□□□ -0.27
PER3-209	ENST00000614998	TTI2	Q6NXR4	508 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	WDR59	Q6PJI9	974 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.34	□□□□□ -0.27
PER3-209	ENST00000614998	DHRSX	Q8N5I4	330 aa		13.34	□□□□□ -0.27
PER3-209	ENST00000614998	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms