RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ATP13A3Q9H7F0 1226 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 RRAGDQ9NQL2 400 aaPredicted RBP14.88□□□□□ -0.03
CD48-203ENST00000613788 RAB6BQ9NRW1 208 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 IL36AQ9UHA7 158 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 ASIC3Q9UHC3 531 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 FAM153AQ9UHL3 310 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 UTP11Q9Y3A2 253 aaKnown RBP14.88□□□□□ -0.03
CD48-203ENST00000613788 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.87□□□□□ -0.03
CD48-203ENST00000613788 TTC24A2A3L6 582 aaPredicted RBP14.87□□□□□ -0.03
CD48-203ENST00000613788 E7EVH7 732 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 PRNPP04156 253 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 CA4P22748 312 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 SERPINA4P29622 427 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 ADCY8P40145 1251 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 VPS41P49754 854 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 CLCN5P51795 746 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 GEMP55040 296 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 MPP3Q13368 585 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 PRPF39Q86UA1 669 aaKnown RBP14.87□□□□□ -0.03
CD48-203ENST00000613788 SPEM1Q8N4L4 309 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 NOA1Q8NC60 698 aaKnown RBP14.87□□□□□ -0.03
CD48-203ENST00000613788 CHST14Q8NCH0 376 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 TMIEQ8NEW7 156 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 OR6K2Q8NGY2 324 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 OR2T3Q8NH03 318 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 ZNF641Q96N77 438 aaPredicted RBP14.87□□□□□ -0.03
CD48-203ENST00000613788 RBM15Q96T37 977 aaKnown RBP eCLIP14.87□□□□□ -0.03
CD48-203ENST00000613788 LRRC1Q9BTT6 524 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 OSBPL1AQ9BXW6 950 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 RAB17Q9H0T7 212 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 ZDHHC6Q9H6R6 413 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 ETNK1Q9HBU6 452 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 POLMQ9NP87 494 aaPredicted RBP14.87□□□□□ -0.03
CD48-203ENST00000613788 VCANP13611 3396 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 A0A1W2PQF6 199 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 ERI2A8K979 691 aaKnown RBP14.87□□□□□ -0.03
CD48-203ENST00000613788 PDGFBP01127 241 aaPredicted RBP14.87□□□□□ -0.03
CD48-203ENST00000613788 DCNP07585 359 aaKnown RBP14.87□□□□□ -0.03
CD48-203ENST00000613788 MMP2P08253 660 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 AOC1P19801 751 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 TNNT3P45378 269 aaPredicted RBP14.87□□□□□ -0.03
CD48-203ENST00000613788 LMAN1P49257 510 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 DGKEP52429 567 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 BASP1P80723 227 aaKnown RBP14.87□□□□□ -0.03
CD48-203ENST00000613788 SKOR1P84550 965 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 CRY1Q16526 586 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 ARSIQ5FYB1 569 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 FAM46CQ5VWP2 391 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 PKN3Q6P5Z2 889 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 GDPD4Q6W3E5 623 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 PCGF5Q86SE9 256 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 TAB3Q8N5C8 712 aaPredicted RBP14.87□□□□□ -0.03
CD48-203ENST00000613788 SPATA22Q8NHS9 363 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 TADA1Q96BN2 335 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 FAM129BQ96TA1 746 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 ERP44Q9BS26 406 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 RSPH9Q9H1X1 276 aaPredicted RBP14.87□□□□□ -0.03
CD48-203ENST00000613788 PPM1HQ9ULR3 514 aa14.87□□□□□ -0.03
CD48-203ENST00000613788 ARIH1Q9Y4X5 557 aaPredicted RBP14.87□□□□□ -0.03
CD48-203ENST00000613788 MUC22E2RYF6 1773 aaPredicted RBP14.86□□□□□ -0.03
CD48-203ENST00000613788 A0A1W2PQ67 120 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 EFCAB8A8MWE9 144 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 C1QTNF3-AMACRE9PGA6 284 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 F5H423 210 aaPredicted RBP14.86□□□□□ -0.03
CD48-203ENST00000613788 NDC80O14777 642 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 SOCS5O75159 536 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 PMPCBO75439 489 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 LEFTY1O75610 366 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 GJB3O75712 270 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 MT-CYBP00156 380 aaPredicted RBP14.86□□□□□ -0.03
CD48-203ENST00000613788 IL1BP01584 269 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 GKP32189 559 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 MRPS25P82663 173 aaKnown RBP14.86□□□□□ -0.03
CD48-203ENST00000613788 SEMA5AQ13591 1074 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 GAS6Q14393 721 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 CWF19L1Q69YN2 538 aaKnown RBP14.86□□□□□ -0.03
CD48-203ENST00000613788 KIAA1211LQ6NV74 962 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 TMEM92Q6UXU6 159 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 PAF1Q8N7H5 531 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 GRIN3AQ8TCU5 1115 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 OXNAD1Q96HP4 312 aaPredicted RBP14.86□□□□□ -0.03
CD48-203ENST00000613788 TRIM51Q9BSJ1 452 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 SUV39H2Q9H5I1 410 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 UBP1Q9NZI7 540 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 PCDHGC4Q9Y5F7 938 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 RAI2Q9Y5P3 530 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 WASF2Q9Y6W5 498 aa14.86□□□□□ -0.03
CD48-203ENST00000613788 TRIOO75962 3097 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 EPOP01588 193 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 COL9A1P20849 921 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 CDK16Q00536 496 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 SATB1Q01826 763 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 CFAP58Q5T655 872 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 FAXCQ5TGI0 409 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 ZNF776Q68DI1 518 aaPredicted RBP14.85□□□□□ -0.03
CD48-203ENST00000613788 MAMSTRQ6ZN01 415 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 CAMK1DQ8IU85 385 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 MMAAQ8IVH4 418 aaKnown RBP14.85□□□□□ -0.03
CD48-203ENST00000613788 KLHDC8BQ8IXV7 354 aa14.85□□□□□ -0.03
CD48-203ENST00000613788 PDCD7Q8N8D1 485 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms