RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 PIAS1O75925 651 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 ADH1CP00326 375 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 SERPINF2P08697 491 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 GSTA2P09210 222 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 MYZAPP0CAP1 466 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 IGFBP4P22692 258 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 OAS2P29728 719 aaKnown RBP14.43□□□□□ -0.1
USP39-220ENST00000613444 PHBP35232 272 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 MTHFRP42898 656 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 SLCO1A2P46721 670 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 SCNN1BP51168 640 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 GEMIN4P57678 1058 aaKnown RBP14.43□□□□□ -0.1
USP39-220ENST00000613444 MLLT1Q03111 559 aaPredicted RBP14.43□□□□□ -0.1
USP39-220ENST00000613444 SLC20A2Q08357 652 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 EFTUD2Q15029 972 aaKnown RBP eCLIP14.43□□□□□ -0.13e-8■■□□□ 13.7
USP39-220ENST00000613444 SLC1A5Q15758 541 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 TNFAIP8L3Q5GJ75 292 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 EP400NLQ6ZTU2 488 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 TMEM135Q86UB9 458 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 CCNJLQ8IV13 435 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 SUSD6Q92537 303 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 FGF14Q92915 247 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 ATP2A3Q93084 1043 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 E2F7Q96AV8 911 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 VOPP1Q96AW1 172 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 NAT9Q9BTE0 207 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 HAUS2Q9NVX0 235 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 RNF40O75150 1001 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 ALDH1A2O94788 518 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 NFATC1O95644 943 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 EPOP01588 193 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 PGAM1P18669 254 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 CES1P23141 567 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 PRKCHP24723 683 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 STK19P49842 368 aaPredicted RBP14.43□□□□□ -0.1
USP39-220ENST00000613444 DMC1Q14565 340 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 GEN1Q17RS7 908 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 HSP90B2PQ58FF3 399 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 CASC4Q6P4E1 433 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 TRMT10BQ6PF06 316 aaKnown RBP14.43□□□□□ -0.1
USP39-220ENST00000613444 NCEH1Q6PIU2 408 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 PARM1Q6UWI2 310 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 GSDMBQ8TAX9 411 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 PGM2Q96G03 612 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 LRCH3Q96II8 777 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 FEM1CQ96JP0 617 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 RPL10LQ96L21 214 aaKnown RBP14.43□□□□□ -0.1
USP39-220ENST00000613444 FCRL3Q96P31 734 aaPredicted RBP14.43□□□□□ -0.1
USP39-220ENST00000613444 DHRS4Q9BTZ2 278 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 ECT2Q9H8V3 914 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 MOCS1Q9NZB8 636 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 FETUBQ9UGM5 382 aa14.43□□□□□ -0.1
USP39-220ENST00000613444 EXOC1LA0A1B0GW35 172 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 GOLGA8KD6RF30 607 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 ATP9BO43861 1147 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 PRLP01236 227 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 SRCP12931 536 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 GBP2P32456 591 aaPredicted RBP14.42□□□□□ -0.1
USP39-220ENST00000613444 RHOAP61586 193 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 MESP2Q0VG99 397 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 CRYMQ14894 314 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 PDGFRLQ15198 375 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 SIRPB2Q5JXA9 342 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 DGKKQ5KSL6 1271 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 CYS1Q717R9 158 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 TTC17Q96AE7 1141 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 ELSPBP1Q96BH3 223 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 ATP6V1G3Q96LB4 118 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 FAM161BQ96MY7 647 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 RPP25Q9BUL9 199 aaKnown RBP14.42□□□□□ -0.1
USP39-220ENST00000613444 KIFC1Q9BW19 673 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 SCUBE2Q9NQ36 999 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 SMYD2Q9NRG4 433 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 THG1LQ9NWX6 298 aaKnown RBP14.42□□□□□ -0.1
USP39-220ENST00000613444 CTNNAL1Q9UBT7 734 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 SOX13Q9UN79 622 aa14.42□□□□□ -0.1
USP39-220ENST00000613444 ZCWPW2A0A1B0GU75 182 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 FAM237BA0A1B0GVD1 139 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 TLDC2A0PJX2 215 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 SMIM23A6NLE4 172 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 TULP3O75386 442 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 CDK18Q07002 472 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 KBTBD12Q3ZCT8 623 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 ATXN7L2Q5T6C5 722 aaPredicted RBP14.41□□□□□ -0.1
USP39-220ENST00000613444 CES3Q6UWW8 571 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 TDRPQ86YL5 185 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 UNC5BQ8IZJ1 945 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 AHI1Q8N157 1196 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 SH2D3CQ8N5H7 860 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 SLC25A41Q8N5S1 370 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 MYLIPQ8WY64 445 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 ZNF778Q96MU6 729 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 KXD1Q9BQD3 176 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 CCDC77Q9BR77 488 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 TDRD1Q9BXT4 1180 aaKnown RBP14.41□□□□□ -0.1
USP39-220ENST00000613444 CHRAC1Q9NRG0 131 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 SLC27A6Q9Y2P4 619 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 MUC22E2RYF6 1773 aaPredicted RBP14.41□□□□□ -0.1
USP39-220ENST00000613444 MAGEB16A2A368 324 aa14.41□□□□□ -0.1
USP39-220ENST00000613444 GOLGA6L10A6NI86 522 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms