RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SEPT3Q9UH03 358 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 APOBEC2Q9Y235 224 aaKnown RBP12.51□□□□□ -0.41
CBWD3-208ENST00000612050 C16orf96A6NNT2 1141 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 TLR4O00206 839 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 SLC31A1O15431 190 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 ZNF821O75541 412 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 ITGAVP06756 1048 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 CYLC1P35663 651 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 HSPA9P38646 679 aaKnown RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 ARHGAP25P42331 645 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 GRK6P43250 576 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 POLR2LP62875 67 aaKnown RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 SIM1P81133 766 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 ARTNQ5T4W7 220 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 ATXN7L2Q5T6C5 722 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 N4BP2L1Q5TBK1 243 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 PARS2Q7L3T8 475 aaKnown RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 POLNQ7Z5Q5 900 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 DCP2Q8IU60 420 aaKnown RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 LRRC49Q8IUZ0 686 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 ARFGAP1Q8N6T3 406 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 HCAR2Q8TDS4 363 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 CXorf40AQ8TE69 158 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 RHBDD1Q8TEB9 315 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 ZNF641Q96N77 438 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 ZNF830Q96NB3 372 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 ZNF599Q96NL3 588 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 ELF4Q99607 663 aaPredicted RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 CPEB1Q9BZB8 566 aaKnown RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 NOL6Q9H6R4 1146 aaKnown RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 IPO11Q9UI26 975 aaKnown RBP12.5□□□□□ -0.41
CBWD3-208ENST00000612050 ANGPTL2Q9UKU9 493 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 INTUQ9ULD6 942 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 MFHAS1Q9Y4C4 1052 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 ACTL7AQ9Y615 435 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 CEP250Q9BV73 2442 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 SPTBN4Q9H254 2564 aa12.5□□□□□ -0.41
CBWD3-208ENST00000612050 A0A1W2PQ67 120 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 A6NNZ2 444 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 TMEM110-MUSTN1A8MSY1 372 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 FPGTO14772 594 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 SH3BP5O60239 455 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 CD160O95971 181 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 MAN1A1P33908 653 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 CTSKP43235 329 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 BCL2L1Q07817 233 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 DPYSQ14117 519 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 MESDQ14696 234 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 TRIP6Q15654 476 aaKnown RBP12.49□□□□□ -0.41
CBWD3-208ENST00000612050 ZNF423Q2M1K9 1284 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 TIGD7Q6NT04 549 aaPredicted RBP12.49□□□□□ -0.41
CBWD3-208ENST00000612050 BRAT1Q6PJG6 821 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.49□□□□□ -0.41
CBWD3-208ENST00000612050 RFFLQ8WZ73 363 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 EXOC2Q96KP1 924 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 CSPG4P5Q96PW8 444 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 MAK16Q9BXY0 300 aaKnown RBP12.49□□□□□ -0.41
CBWD3-208ENST00000612050 SLC17A9Q9BYT1 436 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 ERVMER34-1Q9H9K5 563 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 PCDH18Q9HCL0 1135 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 DKK3Q9UBP4 350 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 FNDC3AQ9Y2H6 1198 aaKnown RBP12.49□□□□□ -0.41
CBWD3-208ENST00000612050 FADS3Q9Y5Q0 445 aa12.49□□□□□ -0.41
CBWD3-208ENST00000612050 DMXL1Q9Y485 3027 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 TP53BP1Q12888 1972 aaPredicted RBP12.48□□□□□ -0.41
CBWD3-208ENST00000612050 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.48□□□□□ -0.41
CBWD3-208ENST00000612050 J3KR12 359 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 PCDHGA12O60330 932 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 GJB3O75712 270 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 THEGLP0DJG4 465 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 KRT10P13645 584 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 CD59P13987 128 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 AMPD1P23109 780 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 IL1R2P27930 398 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 NOP2P46087 812 aaKnown RBP12.48□□□□□ -0.41
CBWD3-208ENST00000612050 CSNK1DP48730 415 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 TAS2R38P59533 333 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 SLC25A11Q02978 314 aaKnown RBP12.48□□□□□ -0.41
CBWD3-208ENST00000612050 NSUN2Q08J23 767 aaKnown RBP eCLIP12.48□□□□□ -0.41
CBWD3-208ENST00000612050 FOXC1Q12948 553 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 LBRQ14739 615 aaKnown RBP12.48□□□□□ -0.41
CBWD3-208ENST00000612050 LAYNQ6UX15 382 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 PIP4P1Q86T03 277 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 CCDC170Q8IYT3 715 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 SLC35G2Q8TBE7 412 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 KLK6Q92876 244 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 CHP1Q99653 195 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 MYOCQ99972 504 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 ZNF670Q9BS34 389 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 SUV39H2Q9H5I1 410 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 IL21RQ9HBE5 538 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 PDFQ9HBH1 243 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 SPTLC3Q9NUV7 552 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 EVA1BQ9NVM1 165 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 CACNA1EQ15878 2313 aa12.48□□□□□ -0.41
CBWD3-208ENST00000612050 A0A1B0GTQ1 180 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 H0Y8X5 98 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 H3BM21 787 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 TM7SF2O76062 418 aa12.47□□□□□ -0.41
CBWD3-208ENST00000612050 PRLRP16471 622 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms