RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 ARL4CP56559 192 aa4.6□□□□□ -1.67
HDDC2-207ENST00000608532 RPL36AP83881 106 aaKnown RBP4.6□□□□□ -1.67
HDDC2-207ENST00000608532 SLC18A2Q05940 514 aa4.6□□□□□ -1.67
HDDC2-207ENST00000608532 NAA25Q14CX7 972 aa4.6□□□□□ -1.67
HDDC2-207ENST00000608532 EDRF1Q3B7T1 1238 aa4.6□□□□□ -1.67
HDDC2-207ENST00000608532 CES5AQ6NT32 575 aa4.6□□□□□ -1.67
HDDC2-207ENST00000608532 IL20RBQ6UXL0 311 aa4.6□□□□□ -1.67
HDDC2-207ENST00000608532 H1FNTQ75WM6 255 aaPredicted RBP4.6□□□□□ -1.67
HDDC2-207ENST00000608532 MB21D2Q8IYB1 491 aaPredicted RBP4.6□□□□□ -1.67
HDDC2-207ENST00000608532 NEXN-AS1Q8NBZ9 246 aa4.6□□□□□ -1.67
HDDC2-207ENST00000608532 CNOT9Q92600 299 aaKnown RBP4.6□□□□□ -1.67
HDDC2-207ENST00000608532 RNF183Q96D59 192 aa4.6□□□□□ -1.67
HDDC2-207ENST00000608532 FIZ1Q96SL8 496 aa4.6□□□□□ -1.67
HDDC2-207ENST00000608532 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
HDDC2-207ENST00000608532 CLK4Q9HAZ1 481 aaKnown RBP4.6□□□□□ -1.67
HDDC2-207ENST00000608532 ALKBH4Q9NXW9 302 aa4.6□□□□□ -1.67
HDDC2-207ENST00000608532 ZNF112Q9UJU3 913 aa4.6□□□□□ -1.67
HDDC2-207ENST00000608532 PLSCR5A0PG75 271 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 TYW5A2RUC4 315 aaKnown RBP4.59□□□□□ -1.67
HDDC2-207ENST00000608532 VWA3AA6NCI4 1184 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 CEP104O60308 925 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 ATP2C2O75185 946 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 LIFRP42702 1097 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 MXI1P50539 228 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 GAS1P54826 345 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 SEC61A1P61619 476 aaKnown RBP4.59□□□□□ -1.67
HDDC2-207ENST00000608532 BNC1Q01954 994 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 FAM27E3Q08E93 113 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 KIF5AQ12840 1032 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 RUNX2Q13950 521 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 RETSATQ6NUM9 610 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 C16orf82Q7Z2V1 217 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 ARMC9Q7Z3E5 817 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 HERC6Q8IVU3 1022 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 TCP11L2Q8N4U5 519 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 PYM1Q9BRP8 204 aaKnown RBP4.59□□□□□ -1.67
HDDC2-207ENST00000608532 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.59□□□□□ -1.67
HDDC2-207ENST00000608532 PPCSQ9HAB8 311 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 RASSF1Q9NS23 344 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 AGO1Q9UL18 857 aaKnown RBP4.59□□□□□ -1.67
HDDC2-207ENST00000608532 PAM16Q9Y3D7 125 aa4.59□□□□□ -1.67
HDDC2-207ENST00000608532 DYTNA2CJ06 578 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 DENND3A2RUS2 1198 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 SH2D7A6NKC9 451 aaPredicted RBP4.58□□□□□ -1.68
HDDC2-207ENST00000608532 TIMM23O14925 209 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 PER2O15055 1255 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 CH25HO95992 272 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 CHRM4P08173 479 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 CNPP09543 421 aaKnown RBP4.58□□□□□ -1.68
HDDC2-207ENST00000608532 HALP42357 657 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 HDAC4P56524 1084 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 DDR1Q08345 913 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 GRSF1Q12849 480 aaKnown RBP eCLIP4.58□□□□□ -1.68
HDDC2-207ENST00000608532 COASYQ13057 564 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 PLEKHO1Q53GL0 409 aaPredicted RBP4.58□□□□□ -1.68
HDDC2-207ENST00000608532 C9orf57Q5W0N0 161 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 SPSB3Q6PJ21 355 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.58□□□□□ -1.682e-7■□□□□ 10.1
HDDC2-207ENST00000608532 MOB3CQ70IA8 216 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 PRSS45Q7RTY3 260 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 DENND6AQ8IWF6 608 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 NKAPQ8N5F7 415 aaKnown RBP4.58□□□□□ -1.68
HDDC2-207ENST00000608532 MCPH1Q8NEM0 835 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 SH3KBP1Q96B97 665 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 LMAN2LQ9H0V9 348 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 RETREG1Q9H6L5 497 aa4.58□□□□□ -1.68
HDDC2-207ENST00000608532 SPATS2LQ9NUQ6 558 aaKnown RBP4.58□□□□□ -1.68
HDDC2-207ENST00000608532 CKAP5Q14008 2032 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 IGLV5-52A0A0A0MRZ9 124 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 PPP1R3DO95685 299 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 MYF6P23409 242 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 CENPAP49450 140 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 EEF1A2Q05639 463 aaKnown RBP4.57□□□□□ -1.68
HDDC2-207ENST00000608532 DCAF6Q58WW2 860 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 EFHC1Q5JVL4 640 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 FBXO47Q5MNV8 452 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 DLK2Q6UY11 383 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.57□□□□□ -1.68
HDDC2-207ENST00000608532 CCDC105Q8IYK2 499 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 CPXM2Q8N436 756 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 RAB40AQ8WXH6 277 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 TRIB2Q92519 343 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 ZSCAN31Q96LW9 406 aaPredicted RBP4.57□□□□□ -1.68
HDDC2-207ENST00000608532 CD180Q99467 661 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 CLSTN3Q9BQT9 956 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 C1QTNF4Q9BXJ3 329 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 EPHX3Q9H6B9 360 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 OR6C3Q9NZP0 311 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 PCDHGB5Q9Y5G0 923 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 PCDHGB3Q9Y5G1 929 aa4.57□□□□□ -1.68
HDDC2-207ENST00000608532 ARHGAP10A1A4S6 786 aa4.56□□□□□ -1.68
HDDC2-207ENST00000608532 SMTNL1A8MU46 457 aa4.56□□□□□ -1.68
HDDC2-207ENST00000608532 RGS11O94810 467 aa4.56□□□□□ -1.68
HDDC2-207ENST00000608532 TTKP33981 857 aa4.56□□□□□ -1.68
HDDC2-207ENST00000608532 TUBA1BP68363 451 aa4.56□□□□□ -1.68
HDDC2-207ENST00000608532 ADORA2A-AS1P86434 159 aa4.56□□□□□ -1.68
HDDC2-207ENST00000608532 ST3GAL1Q11201 340 aa4.56□□□□□ -1.68
HDDC2-207ENST00000608532 TDGQ13569 410 aa4.56□□□□□ -1.68
HDDC2-207ENST00000608532 ARHGEF6Q15052 776 aa4.56□□□□□ -1.68
HDDC2-207ENST00000608532 SF3B4Q15427 424 aaKnown RBP eCLIP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms