RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 SPARCL1Q14515 664 aa11.27□□□□□ -0.6
CTCFL-214ENST00000608108 PCSK7Q16549 785 aa11.27□□□□□ -0.6
CTCFL-214ENST00000608108 SLC44A4Q53GD3 710 aa11.27□□□□□ -0.6
CTCFL-214ENST00000608108 TMEM196Q5HYL7 178 aa11.27□□□□□ -0.6
CTCFL-214ENST00000608108 EGFLAMQ63HQ2 1017 aa11.27□□□□□ -0.6
CTCFL-214ENST00000608108 KCTD11Q693B1 232 aa11.27□□□□□ -0.6
CTCFL-214ENST00000608108 CCNI2Q6ZMN8 369 aaPredicted RBP11.27□□□□□ -0.6
CTCFL-214ENST00000608108 TPRG1Q6ZUI0 275 aa11.27□□□□□ -0.6
CTCFL-214ENST00000608108 Q6ZVU0 165 aa11.27□□□□□ -0.6
CTCFL-214ENST00000608108 RYBPQ8N488 228 aaPredicted RBP11.27□□□□□ -0.6
CTCFL-214ENST00000608108 EIF1ADQ8N9N8 165 aaKnown RBP11.27□□□□□ -0.6
CTCFL-214ENST00000608108 OR6K2Q8NGY2 324 aa11.27□□□□□ -0.6
CTCFL-214ENST00000608108 FRS2Q8WU20 508 aa11.27□□□□□ -0.6
CTCFL-214ENST00000608108 MSANTD3Q96H12 275 aa11.27□□□□□ -0.6
CTCFL-214ENST00000608108 FMO2Q99518 471 aa11.27□□□□□ -0.6
CTCFL-214ENST00000608108 LRRC40Q9H9A6 602 aa11.27□□□□□ -0.6
CTCFL-214ENST00000608108 MTRF1LQ9UGC7 380 aaKnown RBP11.27□□□□□ -0.6
CTCFL-214ENST00000608108 BDP1A6H8Y1 2624 aa11.27□□□□□ -0.6
CTCFL-214ENST00000608108 K7EQS6 105 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 PSMD3O43242 534 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 SUN1O94901 812 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 EGFP01133 1207 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 TNFRSF4P43489 277 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 MAPK8P45983 427 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 RECQLP46063 649 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-214ENST00000608108 SEC13P55735 322 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 AP1S1P61966 158 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 SKOR1P84550 965 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 CDK16Q00536 496 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 GRSF1Q12849 480 aaKnown RBP eCLIP11.27□□□□□ -0.61
CTCFL-214ENST00000608108 OLIG2Q13516 323 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 ZNF234Q14588 700 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 IHHQ14623 411 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 MLF2Q15773 248 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-214ENST00000608108 CARD16Q5EG05 197 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 RALGPS1Q5JS13 557 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 FSTL4Q6MZW2 842 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 SERPINA13PQ6UXR4 307 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 PPP1R21Q6ZMI0 780 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 SRLQ86TD4 932 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 KLHDC8BQ8IXV7 354 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 ZCCHC9Q8N567 271 aaKnown RBP11.27□□□□□ -0.61
CTCFL-214ENST00000608108 ZNF366Q8N895 744 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 ZNF513Q8N8E2 541 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-214ENST00000608108 KDM1BQ8NB78 822 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 EZH1Q92800 747 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-214ENST00000608108 TADA1Q96BN2 335 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 MRGPRX2Q96LB1 330 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 ASB2Q96Q27 587 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 ZDHHC4Q9NPG8 344 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 THAP10Q9P2Z0 257 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-214ENST00000608108 STARD13Q9Y3M8 1113 aa11.27□□□□□ -0.61
CTCFL-214ENST00000608108 MUC3AQ02505 3323 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 MYLKQ15746 1914 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 ANTXRLA6NF34 631 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 USP12O75317 370 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 BMP1P13497 986 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 HLA-EP13747 358 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 DRD1P21728 446 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 IL12RB1P42701 662 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 TNNT3P45378 269 aaPredicted RBP11.26□□□□□ -0.61
CTCFL-214ENST00000608108 CSNK1DP48730 415 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 CCNHP51946 323 aaPredicted RBP11.26□□□□□ -0.61
CTCFL-214ENST00000608108 WNT3AP56704 352 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 SARNPP82979 210 aaKnown RBP11.26□□□□□ -0.61
CTCFL-214ENST00000608108 MTM1Q13496 603 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 SLC14A2Q15849 920 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 HIF1AQ16665 826 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 NAPEPLDQ6IQ20 393 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 NCEH1Q6PIU2 408 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 KDELC1Q6UW63 502 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 DPY19L3Q6ZPD9 716 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 ZNF534Q76KX8 674 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 KDELC2Q7Z4H8 507 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 MCUQ8NE86 351 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 OR2A12Q8NGT7 310 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.26□□□□□ -0.61
CTCFL-214ENST00000608108 FAM3CQ92520 227 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 NSMCE3Q96MG7 304 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 SERPINB12Q96P63 405 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 TBL1YQ9BQ87 522 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 APOL2Q9BQE5 337 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 FICDQ9BVA6 458 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 TMEM245Q9H330 911 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 ARHGEF3Q9NR81 526 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 CACNA2D2Q9NY47 1150 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 HECAQ9UBI9 543 aaPredicted RBP11.26□□□□□ -0.61
CTCFL-214ENST00000608108 EVLQ9UI08 416 aaPredicted RBP11.26□□□□□ -0.61
CTCFL-214ENST00000608108 HCN2Q9UL51 889 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 CA14Q9ULX7 337 aa11.26□□□□□ -0.61
CTCFL-214ENST00000608108 EDDM13A0A1B0GTR0 161 aa11.25□□□□□ -0.61
CTCFL-214ENST00000608108 SHISA7A6NL88 538 aa11.25□□□□□ -0.61
CTCFL-214ENST00000608108 MAN2B1O00754 1011 aa11.25□□□□□ -0.61
CTCFL-214ENST00000608108 NPC1O15118 1278 aa11.25□□□□□ -0.61
CTCFL-214ENST00000608108 HNRNPLP14866 589 aaKnown RBP eCLIP11.25□□□□□ -0.61
CTCFL-214ENST00000608108 GKP32189 559 aa11.25□□□□□ -0.61
CTCFL-214ENST00000608108 GRIA1P42261 906 aa11.25□□□□□ -0.61
CTCFL-214ENST00000608108 KIR2DL1P43626 348 aaPredicted RBP11.25□□□□□ -0.61
CTCFL-214ENST00000608108 ARL4CP56559 192 aa11.25□□□□□ -0.61
CTCFL-214ENST00000608108 BRD3Q15059 726 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms