RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	TM6SF2	Q9BZW4	377 aa		21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	TCEAL2	Q9H3H9	227 aa	Predicted RBP	21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	RETREG1	Q9H6L5	497 aa		21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	THSD1	Q9NS62	852 aa		21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	PTPN13	Q12923	2485 aa		21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	GOLGA8S	H3BPF8	625 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	GCAT	O75600	419 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	GSR	P00390	522 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	SGCG	Q13326	291 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	CAMK4	Q16566	473 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	PERM1	Q5SV97	790 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	ARHGAP40	Q5TG30	622 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	KLHDC7A	Q5VTJ3	777 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	NOP9	Q86U38	636 aa	Known RBP	21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	MLKL	Q8NB16	471 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	TPCN2	Q8NHX9	752 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	ATXN7L3B	Q96GX2	97 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	TBATA	Q96M53	351 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	OR12D3	Q9UGF7	316 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	ITM2B	Q9Y287	266 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	PCDHGA8	Q9Y5G5	932 aa		21.35	■■□□□ 1.01
NECAB3-222	ENST00000607805	FAM170A	A1A519	330 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	CPED1	A4D0V7	1026 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	CAPN8	A6NHC0	703 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	CDRT15L2	A8MXV6	281 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	FAM72C	H0Y354	149 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	CASC3	O15234	703 aa	Known RBP	21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	TCEA3	O75764	348 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	ADRA1B	P35368	520 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	MAPKAPK2	P49137	400 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	PDX1	P52945	283 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	VWA3B	Q502W6	1294 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	C3orf38	Q5JPI3	329 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	FAM72A	Q5TYM5	149 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	TAF3	Q5VWG9	929 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	FAM72D	Q6L9T8	149 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	FAM72B	Q86X60	149 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	RBFA	Q8N0V3	343 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	OR2AP1	Q8NGE2	309 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	OR6K2	Q8NGY2	324 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	LMX1A	Q8TE12	382 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	BTN2A2	Q8WVV5	523 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	CPA5	Q8WXQ8	436 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	MAGEB5	Q9BZ81	275 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	SEMA4C	Q9C0C4	833 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	PDCL3	Q9H2J4	239 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	TMEM248	Q9NWD8	314 aa		21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	IPO11	Q9UI26	975 aa	Known RBP	21.34	■■□□□ 1.01
NECAB3-222	ENST00000607805	PMS2P1	A4D2B8	440 aa		21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	LMO7DN	F2Z398	122 aa		21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	KLK10	O43240	276 aa		21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	RHOQ	P17081	205 aa		21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	IGFALS	P35858	605 aa		21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	ETFB	P38117	255 aa		21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	RAPGEF1	Q13905	1077 aa		21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	RBM44	Q6ZP01	1051 aa	Known RBP	21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	SLC35F3	Q8IY50	421 aa		21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	EMC1	Q8N766	993 aa		21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	EPS8L1	Q8TE68	723 aa		21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	IL12RB2	Q99665	862 aa		21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	TUBGCP2	Q9BSJ2	902 aa		21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	MAGEH1	Q9H213	219 aa		21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	SPAST	Q9UBP0	616 aa		21.33	■■□□□ 1.01
NECAB3-222	ENST00000607805	POP4	O95707	220 aa	Known RBP	21.32	■■□□□ 1
NECAB3-222	ENST00000607805	UGT2B4	P06133	528 aa		21.32	■■□□□ 1
NECAB3-222	ENST00000607805	MME	P08473	750 aa		21.32	■■□□□ 1
NECAB3-222	ENST00000607805	UCHL3	P15374	230 aa		21.32	■■□□□ 1
NECAB3-222	ENST00000607805	GEMIN4	P57678	1058 aa	Known RBP	21.32	■■□□□ 1
NECAB3-222	ENST00000607805	SNRPD1	P62314	119 aa	Known RBP	21.32	■■□□□ 1
NECAB3-222	ENST00000607805	YPEL5	P62699	121 aa		21.32	■■□□□ 1
NECAB3-222	ENST00000607805	ATP11A	P98196	1134 aa		21.32	■■□□□ 1
NECAB3-222	ENST00000607805	VAC14	Q08AM6	782 aa		21.32	■■□□□ 1
NECAB3-222	ENST00000607805	NR0B2	Q15466	257 aa		21.32	■■□□□ 1
NECAB3-222	ENST00000607805	MYLK3	Q32MK0	819 aa		21.32	■■□□□ 1
NECAB3-222	ENST00000607805	CCDC14	Q49A88	953 aa		21.32	■■□□□ 1
NECAB3-222	ENST00000607805	TAF1B	Q53T94	588 aa	Predicted RBP	21.32	■■□□□ 1
NECAB3-222	ENST00000607805	C6orf132	Q5T0Z8	1188 aa		21.32	■■□□□ 1
NECAB3-222	ENST00000607805	CLEC14A	Q86T13	490 aa		21.32	■■□□□ 1
NECAB3-222	ENST00000607805	CENPI	Q92674	756 aa	Predicted RBP	21.32	■■□□□ 1
NECAB3-222	ENST00000607805	LRRC61	Q9BV99	259 aa		21.32	■■□□□ 1
NECAB3-222	ENST00000607805	OSBPL1A	Q9BXW6	950 aa		21.32	■■□□□ 1
NECAB3-222	ENST00000607805	CLPB	Q9H078	707 aa		21.32	■■□□□ 1
NECAB3-222	ENST00000607805	METTL5	Q9NRN9	209 aa	Known RBP	21.32	■■□□□ 1
NECAB3-222	ENST00000607805	NOCT	Q9UK39	431 aa	Known RBP	21.32	■■□□□ 1
NECAB3-222	ENST00000607805	ADK	P55263	362 aa	Known RBP	21.31	■■□□□ 1
NECAB3-222	ENST00000607805	C15orf59	Q2T9L4	293 aa	Predicted RBP	21.31	■■□□□ 1
NECAB3-222	ENST00000607805	PRRT3	Q5FWE3	981 aa		21.31	■■□□□ 1
NECAB3-222	ENST00000607805	NAA35	Q5VZE5	725 aa		21.31	■■□□□ 1
NECAB3-222	ENST00000607805	PHACTR4	Q8IZ21	702 aa		21.31	■■□□□ 1
NECAB3-222	ENST00000607805	TP53I13	Q8NBR0	393 aa	Predicted RBP	21.31	■■□□□ 1
NECAB3-222	ENST00000607805	MSANTD4	Q8NCY6	345 aa		21.31	■■□□□ 1
NECAB3-222	ENST00000607805	ARHGEF26	Q96DR7	871 aa		21.31	■■□□□ 1
NECAB3-222	ENST00000607805	KLHL32	Q96NJ5	620 aa		21.31	■■□□□ 1
NECAB3-222	ENST00000607805	STK33	Q9BYT3	514 aa		21.31	■■□□□ 1
NECAB3-222	ENST00000607805	APOBEC3B	Q9UH17	382 aa	Known RBP	21.31	■■□□□ 1
NECAB3-222	ENST00000607805	DNAI1	Q9UI46	699 aa		21.31	■■□□□ 1
NECAB3-222	ENST00000607805	FLNC	Q14315	2725 aa		21.31	■■□□□ 1
NECAB3-222	ENST00000607805	UBR5	O95071	2799 aa	Predicted RBP	21.31	■■□□□ 1
NECAB3-222	ENST00000607805	C2CD4B	A6NLJ0	364 aa		21.3	■■□□□ 1
NECAB3-222	ENST00000607805		F8VZ95	297 aa		21.3	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms