RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 TEX45Q8NA69 505 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 PPHLN1Q8NEY8 458 aaKnown RBP4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 GPT2Q8TD30 523 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 SLC25A28Q96A46 364 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 SKA1Q96BD8 255 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 ZNF48Q96MX3 618 aaPredicted RBP4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 C7orf26Q96N11 449 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 CAMK1GQ96NX5 476 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 YME1L1Q96TA2 773 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 MSTO1Q9BUK6 570 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 SLC29A3Q9BZD2 475 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 LHPPQ9H008 270 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 FZD3Q9NPG1 666 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 SIRT3Q9NTG7 399 aaPredicted RBP4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 SMC4Q9NTJ3 1288 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 BABAM1Q9NWV8 329 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 CTNNAL1Q9UBT7 734 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 AASSQ9UDR5 926 aa4.11□□□□□ -1.75
RNU6-88P-201ENST00000606801 A0A096LPK6 155 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 TEX13CA0A0J9YWL9 993 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 GAGE12JA6NER3 117 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 KLRF2D3W0D1 207 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 SOCS2O14508 198 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 KLK8O60259 260 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 USO1O60763 962 aaKnown RBP4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 SEC31AO94979 1220 aaKnown RBP4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 FMO4P31512 558 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 DCTDP32321 178 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 ABCD1P33897 745 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 RFC1P35251 1148 aaPredicted RBP4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 POLD2P49005 469 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 CCR9P51686 369 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 GRIK3Q13003 919 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 PTGR1Q14914 329 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 ATG9BQ674R7 924 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 HEPHL1Q6MZM0 1159 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 PARM1Q6UWI2 310 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 RSRC2Q7L4I2 434 aaKnown RBP4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 GPAT4Q86UL3 456 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 CNTROBQ8N137 903 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 C11orf65Q8NCR3 313 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 GABPB2Q8TAK5 448 aaPredicted RBP4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 METTL6Q8TCB7 284 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 BICD2Q8TD16 824 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 SNAPC3Q92966 411 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 KIF1BPQ96EK5 621 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 ZNF333Q96JL9 665 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 NPFFR1Q9GZQ6 430 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 ISCUQ9H1K1 167 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 PLEKHA4Q9H4M7 779 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 TASP1Q9H6P5 420 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 VEZTQ9HBM0 779 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 MPP6Q9NZW5 540 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 PIAS3Q9Y6X2 628 aa4.1□□□□□ -1.75
RNU6-88P-201ENST00000606801 A0A087X0M5 115 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 A0A0U1RQF3 1178 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 A0A1B0GX30 115 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 HSPB2A8KAH6 182 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 BECN2A8MW95 431 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 NPIPB11E5RHQ5 1161 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 LDB2O43679 373 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 TMEM191BP0C7N4 346 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 MYZAPP0CAP1 466 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 PSG1P11464 419 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 ENO3P13929 434 aaPredicted RBP4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 SLC2A4P14672 509 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 PTPN2P17706 415 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 ITGAXP20702 1163 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 GNLYP22749 145 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 MAPK4P31152 587 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 THPOP40225 353 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 GPR12P47775 334 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 CLCN5P51795 746 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 PMS2P54278 862 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 GEMIN4P57678 1058 aaKnown RBP4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 CAPSQ13938 189 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 LPIN1Q14693 890 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 RNPS1Q15287 305 aaKnown RBP4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 TAF11Q15544 211 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 TBCEQ15813 527 aaPredicted RBP4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 HSPB2Q16082 182 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 ZNF284Q2VY69 593 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 PLEKHO1Q53GL0 409 aaPredicted RBP4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 FAAH2Q6GMR7 532 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 Q6ZSV7 163 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 NOXA1Q86UR1 476 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 CAMK1DQ8IU85 385 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 DHX40Q8IX18 779 aaKnown RBP4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 DIS3L2Q8IYB7 885 aaKnown RBP4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 KIAA2013Q8IYS2 634 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 NEXN-AS1Q8NBZ9 246 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 HDAC2Q92769 488 aaKnown RBP4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 TMEM18Q96B42 140 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 BRF2Q9HAW0 419 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 IRAK4Q9NWZ3 460 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 TAS2R10Q9NYW0 307 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 RNF7Q9UBF6 113 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 NDRG3Q9UGV2 375 aa4.09□□□□□ -1.75
RNU6-88P-201ENST00000606801 CAPN7Q9Y6W3 813 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms