RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 PBXIP1Q96AQ6 731 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 IMP4Q96G21 291 aaKnown RBP7.78□□□□□ -1.16
MSH6-211ENST00000606499 OXNAD1Q96HP4 312 aaPredicted RBP7.78□□□□□ -1.16
MSH6-211ENST00000606499 HHIPQ96QV1 700 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 NUDCD1Q96RS6 583 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 FAM129BQ96TA1 746 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 VAT1Q99536 393 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 TRIM51Q9BSJ1 452 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 GBA3Q9H227 469 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 L2HGDHQ9H9P8 463 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 PCDH9Q9HC56 1237 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 SCUBE2Q9NQ36 999 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 RRAGDQ9NQL2 400 aaPredicted RBP7.78□□□□□ -1.16
MSH6-211ENST00000606499 UBP1Q9NZI7 540 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 IL36AQ9UHA7 158 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 PCYOX1Q9UHG3 505 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 SARDHQ9UL12 918 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 NEU2Q9Y3R4 380 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 WASF2Q9Y6W5 498 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 EML5Q05BV3 1969 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 MYO15AQ9UKN7 3530 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 CUL9Q8IWT3 2517 aa7.78□□□□□ -1.16
MSH6-211ENST00000606499 CTAGE15A4D2H0 777 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 PLK4O00444 970 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 RAD51CO43502 376 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 ATG13O75143 517 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 PMPCBO75439 489 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 LEFTY1O75610 366 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 ZNF189O75820 626 aaPredicted RBP7.77□□□□□ -1.17
MSH6-211ENST00000606499 POP4O95707 220 aaKnown RBP7.77□□□□□ -1.17
MSH6-211ENST00000606499 GAS8O95995 478 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 IL1BP01584 269 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 KRT14P02533 472 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 UGT2B4P06133 528 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 CTAGE8P0CG41 777 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 GABRG2P18507 467 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 NDUFV2P19404 249 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 STIP1P31948 543 aaKnown RBP7.77□□□□□ -1.17
MSH6-211ENST00000606499 CSNK1DP48730 415 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 CLCN5P51795 746 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 AP1S1P61966 158 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 SKOR1P84550 965 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 SATB1Q01826 763 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 NSUN2Q08J23 767 aaKnown RBP eCLIP7.77□□□□□ -1.17
MSH6-211ENST00000606499 TRAF2Q12933 501 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 PTK6Q13882 451 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 DHX34Q14147 1143 aaKnown RBP7.77□□□□□ -1.17
MSH6-211ENST00000606499 PPP1R7Q15435 360 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 CST6Q15828 149 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 PCSK7Q16549 785 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 P3H1Q32P28 736 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 ARSIQ5FYB1 569 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 ITPRIPL1Q6GPH6 555 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 C8orf74Q6P047 294 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 NCEH1Q6PIU2 408 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 KDELC2Q7Z4H8 507 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 PRPF39Q86UA1 669 aaKnown RBP7.77□□□□□ -1.17
MSH6-211ENST00000606499 CTAGE6Q86UF2 777 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 JAMLQ86YT9 394 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 CAMK1DQ8IU85 385 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 MMAAQ8IVH4 418 aaKnown RBP7.77□□□□□ -1.17
MSH6-211ENST00000606499 CTAGE4Q8IX94 777 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 PLPP6Q8IY26 295 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 SPEM1Q8N4L4 309 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 FBXL6Q8N531 539 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 CEP112Q8N8E3 955 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 MNS1Q8NEH6 495 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 OR2T3Q8NH03 318 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 PIP4K2CQ8TBX8 421 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 HMGB4Q8WW32 186 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 SLCO2A1Q92959 643 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 HEPHQ9BQS7 1158 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 MLPHQ9BV36 600 aaPredicted RBP7.77□□□□□ -1.17
MSH6-211ENST00000606499 MKRN2Q9H000 416 aaKnown RBP7.77□□□□□ -1.17
MSH6-211ENST00000606499 SLC25A51Q9H1U9 297 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 RSPH9Q9H1X1 276 aaPredicted RBP7.77□□□□□ -1.17
MSH6-211ENST00000606499 ATP13A3Q9H7F0 1226 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 C11orf16Q9NQ32 467 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 RAB6BQ9NRW1 208 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 HAUS2Q9NVX0 235 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 PAK5Q9P286 719 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 SUN2Q9UH99 717 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 FARP1Q9Y4F1 1045 aaPredicted RBP7.77□□□□□ -1.17
MSH6-211ENST00000606499 PCDHGC4Q9Y5F7 938 aa7.77□□□□□ -1.17
MSH6-211ENST00000606499 MYO18AQ92614 2054 aaKnown RBP7.76□□□□□ -1.17
MSH6-211ENST00000606499 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.76□□□□□ -1.17
MSH6-211ENST00000606499 KPNA3O00505 521 aaPredicted RBP7.76□□□□□ -1.17
MSH6-211ENST00000606499 ALOX15BO15296 676 aa7.76□□□□□ -1.17
MSH6-211ENST00000606499 MID1O15344 667 aa7.76□□□□□ -1.17
MSH6-211ENST00000606499 USP12O75317 370 aa7.76□□□□□ -1.17
MSH6-211ENST00000606499 PRNPP04156 253 aa7.76□□□□□ -1.17
MSH6-211ENST00000606499 PDHA1P08559 390 aa7.76□□□□□ -1.17
MSH6-211ENST00000606499 SERPINF2P08697 491 aa7.76□□□□□ -1.17
MSH6-211ENST00000606499 SERPINA4P29622 427 aa7.76□□□□□ -1.17
MSH6-211ENST00000606499 ACTN2P35609 894 aa7.76□□□□□ -1.17
MSH6-211ENST00000606499 MAGEA9P43362 315 aa7.76□□□□□ -1.17
MSH6-211ENST00000606499 MAPK8P45983 427 aa7.76□□□□□ -1.17
MSH6-211ENST00000606499 PXNP49023 591 aaPredicted RBP7.76□□□□□ -1.17
MSH6-211ENST00000606499 DGKEP52429 567 aa7.76□□□□□ -1.17
MSH6-211ENST00000606499 RPS14P62263 151 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms