RNA–Protein interactions for RNA: ENST00000604440.5

SH3D19-212, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-212ENST00000604440 TC2NQ8N9U0 490 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 TXNDC5Q8NBS9 432 aaKnown RBP9.06□□□□□ -0.96
SH3D19-212ENST00000604440 HJURPQ8NCD3 748 aaPredicted RBP9.06□□□□□ -0.96
SH3D19-212ENST00000604440 GPBAR1Q8TDU6 330 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 FAM172AQ8WUF8 416 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 SORCS1Q8WY21 1168 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 BTN2A3PQ96KV6 586 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 ACOX2Q99424 681 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 KRTAP4-9Q9BYQ8 210 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 MAGEB5Q9BZ81 275 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 TRIM7Q9C029 511 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 WDCPQ9H6R7 721 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 VPS45Q9NRW7 570 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 ABCB8Q9NUT2 735 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.06□□□□□ -0.96
SH3D19-212ENST00000604440 CNOT8Q9UFF9 292 aaKnown RBP9.06□□□□□ -0.96
SH3D19-212ENST00000604440 SLC12A6Q9UHW9 1150 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 STOML2Q9UJZ1 356 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 VANGL2Q9ULK5 521 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 HS3ST4Q9Y661 456 aa9.06□□□□□ -0.96
SH3D19-212ENST00000604440 HELZ2Q9BYK8 2649 aaKnown RBP9.06□□□□□ -0.96
SH3D19-212ENST00000604440 TYW5A2RUC4 315 aaKnown RBP9.05□□□□□ -0.96
SH3D19-212ENST00000604440 SIGLEC16A6NMB1 481 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 SRRM3A6NNA2 597 aaPredicted RBP9.05□□□□□ -0.96
SH3D19-212ENST00000604440 GFRA2O00451 464 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 AKR1B10O60218 316 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 RTN2O75298 545 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 RPP40O75818 363 aaKnown RBP9.05□□□□□ -0.96
SH3D19-212ENST00000604440 CISD3P0C7P0 127 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 SLC2A3P11169 496 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 NME2P22392 152 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 CD70P32970 193 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 NTF4P34130 210 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 CYLC1P35663 651 aaPredicted RBP9.05□□□□□ -0.96
SH3D19-212ENST00000604440 EIF2DP41214 584 aaKnown RBP9.05□□□□□ -0.96
SH3D19-212ENST00000604440 CXCR3P49682 368 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 GSCP56915 257 aaPredicted RBP9.05□□□□□ -0.96
SH3D19-212ENST00000604440 MAMLD1Q13495 774 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 CDH18Q13634 790 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 AUHQ13825 339 aaKnown RBP9.05□□□□□ -0.96
SH3D19-212ENST00000604440 CCDC6Q16204 474 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 FBXO43Q4G163 708 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 CCDC122Q5T0U0 273 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 DAB2IPQ5VWQ8 1189 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 SCYL2Q6P3W7 929 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 ANKS1BQ7Z6G8 1248 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 KBTBD6Q86V97 674 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 MFN1Q8IWA4 741 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 CCDC185Q8N715 623 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 ZNF513Q8N8E2 541 aaPredicted RBP9.05□□□□□ -0.96
SH3D19-212ENST00000604440 USP33Q8TEY7 942 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 CYB5D2Q8WUJ1 264 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 IGSF8Q969P0 613 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 NT5C3BQ969T7 300 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 CCDC42Q96M95 316 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 RPRD1AQ96P16 312 aaPredicted RBP9.05□□□□□ -0.96
SH3D19-212ENST00000604440 CHP1Q99653 195 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 PRMT1Q99873 361 aaKnown RBP9.05□□□□□ -0.96
SH3D19-212ENST00000604440 DDX50Q9BQ39 737 aaKnown RBP9.05□□□□□ -0.96
SH3D19-212ENST00000604440 CIPCQ9C0C6 399 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 THAP2Q9H0W7 228 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 SSU72Q9NP77 194 aaKnown RBP9.05□□□□□ -0.96
SH3D19-212ENST00000604440 SPTLC3Q9NUV7 552 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 ARHGEF38Q9NXL2 777 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 RRN3Q9NYV6 651 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 SNX11Q9Y5W9 270 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 RAD54BQ9Y620 910 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 PCNX2A6NKB5 2137 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 ADAMTS20P59510 1910 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 BPTFQ12830 3046 aa9.05□□□□□ -0.96
SH3D19-212ENST00000604440 ANKRD62A6NC57 917 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 WASH3PC4AMC7 463 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 H0Y626 953 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 SGK1O00141 431 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 SRGAP2O75044 1071 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 LUC7L3O95232 432 aaKnown RBP9.04□□□□□ -0.96
SH3D19-212ENST00000604440 F9P00740 461 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 PABPC1P11940 636 aaKnown RBP9.04□□□□□ -0.96
SH3D19-212ENST00000604440 GZMAP12544 262 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 HNRNPLP14866 589 aaKnown RBP eCLIP9.04□□□□□ -0.961e-6■■■■□ 19.8
SH3D19-212ENST00000604440 PSMA2P25787 234 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 HLA-FP30511 346 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 HNRNPH3P31942 346 aaKnown RBP9.04□□□□□ -0.96
SH3D19-212ENST00000604440 PTPN9P43378 593 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 KIR2DL1P43626 348 aaPredicted RBP9.04□□□□□ -0.96
SH3D19-212ENST00000604440 NOVA1P51513 510 aaKnown RBP9.04□□□□□ -0.96
SH3D19-212ENST00000604440 HDAC4P56524 1084 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 LMAN2Q12907 356 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 DMC1Q14565 340 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 SPA17Q15506 151 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 PLK5Q496M5 336 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 FSCBQ5H9T9 825 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 BRMS1LQ5PSV4 323 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 TMEM215Q68D42 235 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 PLEKHA7Q6IQ23 1121 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 FBXL22Q6P050 247 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 ALKBH5Q6P6C2 394 aaKnown RBP9.04□□□□□ -0.96
SH3D19-212ENST00000604440 SPOCD1Q6ZMY3 1216 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 CHST9Q7L1S5 443 aa9.04□□□□□ -0.96
SH3D19-212ENST00000604440 SPACA3Q8IXA5 215 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms