RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 LRRN3Q9H3W5 708 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ARMCX3Q9UH62 379 aaPredicted RBP11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 GPR34Q9UPC5 381 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 HPSEQ9Y251 543 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 GRAP2O75791 330 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ZSCAN22P10073 491 aaPredicted RBP11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CMA1P23946 247 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 FMO5P49326 533 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SERPINH1P50454 418 aaKnown RBP11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CCNHP51946 323 aaPredicted RBP11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 DNM1Q05193 864 aaKnown RBP11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PDCLQ13371 301 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 NCAPHQ15003 741 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ELOCQ15369 112 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 C5orf22Q49AR2 442 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CARD16Q5EG05 197 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 TFAP2DQ7Z6R9 452 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PCDH20Q8N6Y1 951 aaKnown RBP11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 OR7D4Q8NG98 312 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 OR6K2Q8NGY2 324 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 TMEM159Q96B96 161 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CENPTQ96BT3 561 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CMKLR1Q99788 373 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SPON2Q9BUD6 331 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CEP44Q9C0F1 390 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ZDHHC6Q9H6R6 413 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ANAPC2Q9UJX6 822 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CFAP45Q9UL16 551 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 FCF1Q9Y324 198 aaKnown RBP11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SNX10Q9Y5X0 201 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ITPR2Q14571 2701 aa11.96□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ABCA12Q86UK0 2595 aa11.96□□□□□ -0.5
PDLIM1P1-201ENST00000604187 C16orf96A6NNT2 1141 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 HSF2BPO75031 334 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 F13A1P00488 732 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ALPIP09923 528 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 KRT5P13647 590 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 CD82P27701 267 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 GKP32189 559 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 EIF4A3P38919 411 aaKnown RBP11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 SYKP43405 635 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 NDUFA8P51970 172 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 YPEL5P62699 121 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ZFP36L1Q07352 338 aaKnown RBP11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 MTA1Q13330 715 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ALG11Q2TAA5 492 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 PHF19Q5T6S3 580 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 RETSATQ6NUM9 610 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 LVRNQ6Q4G3 990 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 SETD3Q86TU7 594 aaPredicted RBP11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 HID1Q8IV36 788 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ARHGEF19Q8IW93 802 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 RYBPQ8N488 228 aaPredicted RBP11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 RAB7BQ96AH8 199 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TSG101Q99816 390 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 SLC12A9Q9BXP2 914 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 EDEM3Q9BZQ6 932 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TM6SF2Q9BZW4 377 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 METTL14Q9HCE5 456 aaKnown RBP11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 MBNL1Q9NR56 388 aaKnown RBP11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TUBD1Q9UJT1 453 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 RCOR1Q9UKL0 485 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 PLAAQ9Y263 795 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 RNF215Q9Y6U7 377 aa11.95□□□□□ -0.5
PDLIM1P1-201ENST00000604187 NYNRINQ9P2P1 1898 aaKnown RBP11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 STMND1H3BQB6 276 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 K7ELQ4 463 aaPredicted RBP11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ZMPSTE24O75844 475 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 LETM1O95202 739 aaPredicted RBP11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 CTSEP14091 401 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 OR1E1P30953 314 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 CCR10P46092 362 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 BLKP51451 505 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 HK3P52790 923 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 FKBP3Q00688 224 aaKnown RBP11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 MEA1Q16626 185 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 LRRC73Q5JTD7 316 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TMEM164Q5U3C3 297 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ATL3Q6DD88 541 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 RD3Q7Z3Z2 195 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TMPRSS9Q7Z410 1059 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 SPRED1Q7Z699 444 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 SLITRK4Q8IW52 837 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ZNF683Q8IZ20 524 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 OR6C4Q8NGE1 309 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 TSACCQ96A04 125 aaPredicted RBP11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 LRRC4CQ9HCJ2 640 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ATP13A1Q9HD20 1204 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ANLNQ9NQW6 1124 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ZNF71Q9NQZ8 489 aaPredicted RBP11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 MPP6Q9NZW5 540 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 ACTL7AQ9Y615 435 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 LRBAP50851 2863 aa11.94□□□□□ -0.5
PDLIM1P1-201ENST00000604187 I6L893 689 aaPredicted RBP11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 THAP12O43422 761 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 MED7O43513 233 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 MMP20O60882 483 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 RASGRP1O95267 797 aa11.93□□□□□ -0.5
PDLIM1P1-201ENST00000604187 GLI1P08151 1106 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms