RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 GABRG3Q99928 467 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 TMEM121BQ9BXQ6 578 aaPredicted RBP11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 CIPCQ9C0C6 399 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 DUSP15Q9H1R2 295 aaPredicted RBP11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 TMEM245Q9H330 911 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 SEPT3Q9UH03 358 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 PCYOX1Q9UHG3 505 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 TRHDEQ9UKU6 1024 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 SLC8A2Q9UPR5 921 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 WASF3Q9UPY6 502 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 PCDH15Q96QU1 1955 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 CCDC163A0A0D9SF12 145 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 TARSL2A2RTX5 802 aaKnown RBP11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 C1QTNF9BB2RNN3 333 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 H7C0C1 242 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 FOXD2O60548 495 aaPredicted RBP11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 OPHN1O60890 802 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 GCATO75600 419 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 TMCC1O94876 653 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 TOP3BO95985 862 aaKnown RBP11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 GSRP00390 522 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 MT-CO1P00395 513 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 C1QTNF9P0C862 333 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 CES1P23141 567 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 PTPN3P26045 913 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 RBL1P28749 1068 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 COILP38432 576 aaPredicted RBP11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 CTSOP43234 321 aaPredicted RBP11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 ATP5OP48047 213 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 ST8SIA6P61647 398 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 SLC10A7Q0GE19 358 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 WASHC5Q12768 1159 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 ZNF234Q14588 700 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 CYTH1Q15438 398 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 SLC14A2Q15849 920 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 P3H1Q32P28 736 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 HNRNPA1L2Q32P51 320 aaKnown RBP11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 MARC1Q5VT66 337 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 ADAT2Q7Z6V5 191 aaKnown RBP11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 SFTPA1Q8IWL2 248 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 ALLCQ8N6M5 410 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 ZNF513Q8N8E2 541 aaPredicted RBP11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 CEP112Q8N8E3 955 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 ATP11CQ8NB49 1132 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 NETO2Q8NC67 525 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 USP33Q8TEY7 942 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 GRK7Q8WTQ7 553 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 ATG4AQ8WYN0 398 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 MAGOHBQ96A72 148 aaKnown RBP11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 TEKT5Q96M29 485 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 MGME1Q9BQP7 344 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 AP1M1Q9BXS5 423 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 FBRSQ9HAH7 460 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 SMARCAL1Q9NZC9 954 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 SUN2Q9UH99 717 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 ATP8A1Q9Y2Q0 1164 aa11.82□□□□□ -0.52
CHMP2A-207ENST00000600804 IGSF10Q6WRI0 2623 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 EDDM13A0A1B0GTR0 161 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 SMAD6O43541 496 aaKnown RBP11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 ZNF821O75541 412 aaPredicted RBP11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 STK10O94804 968 aaKnown RBP11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 CR2P20023 1033 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 NTSR1P30989 418 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 MMP13P45452 471 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 MAPK8P45983 427 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 STK19P49842 368 aaPredicted RBP11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 ZBTB17Q13105 803 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 DLG2Q15700 870 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 EGFLAMQ63HQ2 1017 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 PSAPL1Q6NUJ1 521 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 TTC27Q6P3X3 843 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 C22orf39Q6P5X5 142 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 C4orf22Q6V702 233 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 SYDE1Q6ZW31 735 aaPredicted RBP11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 KLHDC8BQ8IXV7 354 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 CCDC33Q8N5R6 958 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 CNTD1Q8N815 330 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 IL17RCQ8NAC3 791 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 CYB5D2Q8WUJ1 264 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 SORCS1Q8WY21 1168 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 ZNF419Q96HQ0 510 aaPredicted RBP11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 SPATA13Q96N96 652 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 RBM22Q9NW64 420 aaKnown RBP eCLIP11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 SLCO3A1Q9UIG8 710 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 ZNF148Q9UQR1 794 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 NEU2Q9Y3R4 380 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 ANKRD36A6QL64 1941 aa11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 GCN1Q92616 2671 aaKnown RBP11.81□□□□□ -0.52
CHMP2A-207ENST00000600804 PLXNB3Q9ULL4 1909 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 WASH3PC4AMC7 463 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 KCNK1O00180 336 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 RNF103O00237 685 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 ALOX15BO15296 676 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 KCNN4O15554 427 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 ATG13O75143 517 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 JCHAINP01591 159 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 PROS1P07225 676 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 SPINK2P20155 84 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 IL12RB1P42701 662 aa11.8□□□□□ -0.52
CHMP2A-207ENST00000600804 SNRPD1P62314 119 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms