RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 DNAJC3Q13217 504 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 FGL2Q14314 439 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 GRM3Q14832 879 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 NR1I3Q14994 352 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 IQCB1Q15051 598 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 PROX2Q3B8N5 592 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 CCDC157Q569K6 752 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 FIGNQ5HY92 759 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 ERMARDQ5T6L9 678 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 GDPD4Q6W3E5 623 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 LEKR1Q6ZMV7 388 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 ZNF571Q7Z3V5 609 aaPredicted RBP16.03■□□□□ 0.16
VRK3-221ENST00000600284 PSTKQ8IV42 348 aaKnown RBP16.03■□□□□ 0.16
VRK3-221ENST00000600284 CACTIN-AS1Q8N1I8 211 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 DENND6BQ8NEG7 585 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 OR6K2Q8NGY2 324 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 HCAR2Q8TDS4 363 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 HMCESQ96FZ2 354 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 KLHL32Q96NJ5 620 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 NAP1L5Q96NT1 182 aaPredicted RBP16.03■□□□□ 0.16
VRK3-221ENST00000600284 FUCA2Q9BTY2 467 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 CPEB1Q9BZB8 566 aaKnown RBP16.03■□□□□ 0.16
VRK3-221ENST00000600284 DKK3Q9UBP4 350 aa16.03■□□□□ 0.16
VRK3-221ENST00000600284 TRPM6Q9BX84 2022 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 TRABD2BA6NFA1 517 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 NEMP2A6NFY4 417 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 IGLON5A6NGN9 336 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 FPGTO14772 594 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 AREL1O15033 823 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 SDC3O75056 442 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 PIAS2O75928 621 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 RNF8O76064 485 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 FTLP02792 175 aaPredicted RBP16.02■□□□□ 0.16
VRK3-221ENST00000600284 ABL2P42684 1182 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 ZNF135P52742 658 aaPredicted RBP16.02■□□□□ 0.16
VRK3-221ENST00000600284 HNRNPKP61978 463 aaKnown RBP eCLIP16.02■□□□□ 0.16
VRK3-221ENST00000600284 KLHL30Q0D2K2 578 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 ATXN7L2Q5T6C5 722 aaPredicted RBP16.02■□□□□ 0.16
VRK3-221ENST00000600284 TTC7BQ86TV6 843 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 SLC22A18ASQ8N1D0 253 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 OR4C6Q8NH72 309 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 TRIM11Q96F44 468 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 KLF6Q99612 283 aaPredicted RBP16.02■□□□□ 0.16
VRK3-221ENST00000600284 KLC2Q9H0B6 622 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 LRRC19Q9H756 370 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 AP4E1Q9UPM8 1137 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 SCINQ9Y6U3 715 aa16.02■□□□□ 0.16
VRK3-221ENST00000600284 CFAP47Q6ZTR5 3102 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 SPTY2D1-AS1A0A0U1RR47 76 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 POM121BA6NF01 834 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 TRIM38O00635 465 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 TOR1BO14657 336 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 RAD51BO15315 384 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 SIGLEC6O43699 453 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 SERPINC1P01008 464 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 MYBL1P10243 752 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 ALPPL2P10696 532 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 JUPP14923 745 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 HCAR3P49019 387 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 TPM4P67936 248 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 E2F1Q01094 437 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 ACAP1Q15027 740 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 CYTH1Q15438 398 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 PTAR1Q7Z6K3 402 aaPredicted RBP16.01■□□□□ 0.15
VRK3-221ENST00000600284 DNAAF5Q86Y56 855 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 ARFGAP1Q8N6T3 406 aa16.01■□□□□ 0.15
VRK3-221ENST00000600284 DHX35Q9H5Z1 703 aaKnown RBP16.01■□□□□ 0.15
VRK3-221ENST00000600284 MRPL47Q9HD33 250 aaKnown RBP16.01■□□□□ 0.15
VRK3-221ENST00000600284 UBA2Q9UBT2 640 aaPredicted RBP16.01■□□□□ 0.15
VRK3-221ENST00000600284 CNOT8Q9UFF9 292 aaKnown RBP16.01■□□□□ 0.15
VRK3-221ENST00000600284 BZW2Q9Y6E2 419 aaKnown RBP16.01■□□□□ 0.15
VRK3-221ENST00000600284 ARID1BQ8NFD5 2236 aaPredicted RBP16■□□□□ 0.15
VRK3-221ENST00000600284 DMXL2Q8TDJ6 3036 aa16■□□□□ 0.15
VRK3-221ENST00000600284 FAM149AA5PLN7 773 aa16■□□□□ 0.15
VRK3-221ENST00000600284 ARHGAP42A6NI28 874 aa16■□□□□ 0.15
VRK3-221ENST00000600284 EEF2KO00418 725 aaKnown RBP16■□□□□ 0.15
VRK3-221ENST00000600284 DDX3XO00571 662 aaKnown RBP eCLIP16■□□□□ 0.15
VRK3-221ENST00000600284 RIOK3O14730 519 aaKnown RBP16■□□□□ 0.15
VRK3-221ENST00000600284 SCAMP1O15126 338 aa16■□□□□ 0.15
VRK3-221ENST00000600284 SPINT1O43278 529 aa16■□□□□ 0.15
VRK3-221ENST00000600284 PRPSAP2O60256 369 aa16■□□□□ 0.15
VRK3-221ENST00000600284 PRAMEF11O60813 436 aa16■□□□□ 0.15
VRK3-221ENST00000600284 CSF2P04141 144 aa16■□□□□ 0.15
VRK3-221ENST00000600284 FZD2Q14332 565 aa16■□□□□ 0.15
VRK3-221ENST00000600284 E4F1Q66K89 784 aaPredicted RBP16■□□□□ 0.15
VRK3-221ENST00000600284 RFX8Q6ZV50 586 aa16■□□□□ 0.15
VRK3-221ENST00000600284 PARGQ86W56 976 aa16■□□□□ 0.15
VRK3-221ENST00000600284 MDM1Q8TC05 714 aa16■□□□□ 0.15
VRK3-221ENST00000600284 RFFLQ8WZ73 363 aa16■□□□□ 0.15
VRK3-221ENST00000600284 CENPTQ96BT3 561 aa16■□□□□ 0.15
VRK3-221ENST00000600284 ZNF641Q96N77 438 aaPredicted RBP16■□□□□ 0.15
VRK3-221ENST00000600284 SNRNP25Q9BV90 132 aaKnown RBP16■□□□□ 0.15
VRK3-221ENST00000600284 DUSP23Q9BVJ7 150 aa16■□□□□ 0.15
VRK3-221ENST00000600284 C1QTNF7Q9BXJ2 289 aa16■□□□□ 0.15
VRK3-221ENST00000600284 ISCUQ9H1K1 167 aa16■□□□□ 0.15
VRK3-221ENST00000600284 PDFQ9HBH1 243 aa16■□□□□ 0.15
VRK3-221ENST00000600284 USP29Q9HBJ7 922 aa16■□□□□ 0.15
VRK3-221ENST00000600284 UCKL1Q9NWZ5 548 aa16■□□□□ 0.15
VRK3-221ENST00000600284 DNAJC28Q9NX36 388 aa16■□□□□ 0.15
VRK3-221ENST00000600284 NLGN3Q9NZ94 848 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms