RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 TAAR9Q96RI9 348 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 GPR34Q9UPC5 381 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 DOLKQ9UPQ8 538 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 FRMD4BQ9Y2L6 1034 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 DAAM1Q9Y4D1 1078 aa17.93■□□□□ 0.46
SSBP4-207ENST00000600244 SMAD6O43541 496 aaKnown RBP17.92■□□□□ 0.46
SSBP4-207ENST00000600244 LEFTY1O75610 366 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 CNTN5O94779 1100 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 APOEP02649 317 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 PNLIPP16233 465 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 NR1D1P20393 614 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 PTMSP20962 102 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 KRTAP21-3Q3LHN1 58 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 PHF19Q5T6S3 580 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 C1QL3Q5VWW1 255 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 MACC1Q6ZN28 852 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 RBM43Q6ZSC3 357 aaKnown RBP17.92■□□□□ 0.46
SSBP4-207ENST00000600244 SPRED1Q7Z699 444 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 HEATR4Q86WZ0 1026 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 CACNA2D3Q8IZS8 1091 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 GRIN3AQ8TCU5 1115 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 EDEM3Q9BZQ6 932 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 TMEM8AQ9HCN3 771 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 IL36AQ9UHA7 158 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 VPS28Q9UK41 221 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 WASF2Q9Y6W5 498 aa17.92■□□□□ 0.46
SSBP4-207ENST00000600244 HIVEP3Q5T1R4 2406 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 WIPF3A6NGB9 483 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 KCNU1A8MYU2 1149 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 ALPIP09923 528 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 VDRP11473 427 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 FGF3P11487 239 aaPredicted RBP17.91■□□□□ 0.46
SSBP4-207ENST00000600244 GLB1P16278 677 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 L1CAMP32004 1257 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 IGFALSP35858 605 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 MCCD1P59942 119 aaPredicted RBP17.91■□□□□ 0.46
SSBP4-207ENST00000600244 ENPEPQ07075 957 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 CDC20Q12834 499 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 STK4Q13043 487 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 EIF4EBP2Q13542 120 aaPredicted RBP17.91■□□□□ 0.46
SSBP4-207ENST00000600244 CAMK4Q16566 473 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 SYPL2Q5VXT5 272 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 FBXL22Q6P050 247 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 LCLAT1Q6UWP7 414 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 DPY19L3Q6ZPD9 716 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 ATP11CQ8NB49 1132 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 KIAA0895Q8NCT3 520 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 PSMB7Q99436 277 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 NUP62CLQ9H1M0 184 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 PRDM8Q9NQV8 689 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 KIAA1468Q9P260 1216 aa17.91■□□□□ 0.46
SSBP4-207ENST00000600244 ZFHX3Q15911 3703 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 TSPAN6O43657 245 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 FBXO21O94952 628 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 SMC2O95347 1197 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 IGLV3-25P01717 112 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 PRKAR1AP10644 381 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 CD19P15391 556 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 RRM1P23921 792 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 OAS2P29728 719 aaKnown RBP17.9■□□□□ 0.46
SSBP4-207ENST00000600244 EIF4A3P38919 411 aaKnown RBP17.9■□□□□ 0.46
SSBP4-207ENST00000600244 BLKP51451 505 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 IRAK1P51617 712 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 HK3P52790 923 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 NFKBIBQ15653 356 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 KLHL40Q2TBA0 621 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 RABGAP1LQ5R372 815 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 CERCAMQ5T4B2 595 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 OGFOD3Q6PK18 319 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 INTS8Q75QN2 995 aaKnown RBP17.9■□□□□ 0.46
SSBP4-207ENST00000600244 BEND5Q7L4P6 421 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 SMARCE1Q969G3 411 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 MMRN2Q9H8L6 949 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 EXOC1Q9NV70 894 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 AKAP7Q9P0M2 348 aaPredicted RBP17.9■□□□□ 0.46
SSBP4-207ENST00000600244 TBC1D30Q9Y2I9 924 aa17.9■□□□□ 0.46
SSBP4-207ENST00000600244 TOR1BO14657 336 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 SNAP91O60641 907 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 RAD1O60671 282 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 ZNF821O75541 412 aaPredicted RBP17.89■□□□□ 0.45
SSBP4-207ENST00000600244 CENPCQ03188 943 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 DEFB109BQ30KR1 87 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 KRT39Q6A163 491 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 TCTN3Q6NUS6 607 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 PARS2Q7L3T8 475 aaKnown RBP17.89■□□□□ 0.45
SSBP4-207ENST00000600244 FAM114A1Q8IWE2 563 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 ATP6V0D2Q8N8Y2 350 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 TFAP2BQ92481 460 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 HSFY1Q96LI6 401 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 MIS12Q9H081 205 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 TNKS2Q9H2K2 1166 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.89■□□□□ 0.45
SSBP4-207ENST00000600244 RMND1Q9NWS8 449 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 RAB20Q9NX57 234 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 TMEM63CQ9P1W3 806 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 MAN1B1Q9UKM7 699 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 KIAA1257Q9ULG3 409 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 B3GALT1Q9Y5Z6 326 aa17.89■□□□□ 0.45
SSBP4-207ENST00000600244 EFCAB7A8K855 629 aa17.88■□□□□ 0.45
SSBP4-207ENST00000600244 HGSO14964 777 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms