RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	22.25	■■□□□ 1.15
LTBP4-227	ENST00000600026	CCDC70	Q6NSX1	233 aa		22.25	■■□□□ 1.15
LTBP4-227	ENST00000600026	C8orf74	Q6P047	294 aa		22.25	■■□□□ 1.15
LTBP4-227	ENST00000600026	DPY19L3	Q6ZPD9	716 aa		22.25	■■□□□ 1.15
LTBP4-227	ENST00000600026	WDR5B	Q86VZ2	330 aa		22.25	■■□□□ 1.15
LTBP4-227	ENST00000600026	TEX26	Q8N6G2	289 aa		22.25	■■□□□ 1.15
LTBP4-227	ENST00000600026	CHST14	Q8NCH0	376 aa		22.25	■■□□□ 1.15
LTBP4-227	ENST00000600026	OR2AP1	Q8NGE2	309 aa		22.25	■■□□□ 1.15
LTBP4-227	ENST00000600026	NELL1	Q92832	810 aa		22.25	■■□□□ 1.15
LTBP4-227	ENST00000600026	EXOC2	Q96KP1	924 aa		22.25	■■□□□ 1.15
LTBP4-227	ENST00000600026	CCDC163	A0A0D9SF12	145 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	FAM187A	A6NFU0	413 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	ALOX15B	O15296	676 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	OPHN1	O60890	802 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	GCAT	O75600	419 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	IGSF6	O95976	241 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	KRT14	P02533	472 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	C7	P10643	843 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	HSPA9	P38646	679 aa	Known RBP	22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	PSMD8	P48556	350 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	NRL	P54845	237 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	GDF10	P55107	478 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	SNRPD1	P62314	119 aa	Known RBP	22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	WASHC5	Q12768	1159 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	TCF15	Q12870	199 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	ZBTB17	Q13105	803 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	ANKRD20A2	Q5SQ80	823 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	ANKRD20A1	Q5TYW2	823 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	ANKRD20A3	Q5VUR7	823 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	ITPRIPL1	Q6GPH6	555 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	C4orf22	Q6V702	233 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	ARHGEF18	Q6ZSZ5	1173 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	PID1	Q7Z2X4	250 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	LONP2	Q86WA8	852 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	MMAA	Q8IVH4	418 aa	Known RBP	22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	PLPP6	Q8IY26	295 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	TSEN2	Q8NCE0	465 aa	Known RBP	22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	OR6K2	Q8NGY2	324 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	PRCC	Q92733	491 aa	Predicted RBP	22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	SIPA1	Q96FS4	1042 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	GDAP1L1	Q96MZ0	367 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	SPATA13	Q96N96	652 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	FAM126A	Q9BYI3	521 aa	Predicted RBP	22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	NT5M	Q9NPB1	228 aa		22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	FARP1	Q9Y4F1	1045 aa	Predicted RBP	22.24	■■□□□ 1.15
LTBP4-227	ENST00000600026	MUSK	O15146	869 aa		22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	RNASEH1	O60930	286 aa	Known RBP	22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	CTSL	P07711	333 aa		22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	PTGIR	P43119	386 aa		22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	RGR	P47804	291 aa		22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	TUBB4B	P68371	445 aa		22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	CST6	Q15828	149 aa		22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	ZNF567	Q8N184	647 aa		22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	RYBP	Q8N488	228 aa	Predicted RBP	22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	CCHCR1	Q8TD31	782 aa		22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	TEKT5	Q96M29	485 aa		22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	AGAP3	Q96P47	875 aa		22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	CEP41	Q9BYV8	373 aa		22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	PCDH9	Q9HC56	1237 aa		22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	PAK5	Q9P286	719 aa		22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	HECA	Q9UBI9	543 aa	Predicted RBP	22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026	IL36A	Q9UHA7	158 aa		22.23	■■□□□ 1.15
LTBP4-227	ENST00000600026		H0Y858	1186 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	RIOK3	O14730	519 aa	Known RBP	22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	TTI1	O43156	1089 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	ITK	Q08881	620 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	GLE1	Q53GS7	698 aa	Known RBP	22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	DSG4	Q86SJ6	1040 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	JAML	Q86YT9	394 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	PGBD5	Q8N414	524 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	NOA1	Q8NC60	698 aa	Known RBP	22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	PIP4K2C	Q8TBX8	421 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	CCDC110	Q8TBZ0	833 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	GRIN3A	Q8TCU5	1115 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	ZNF419	Q96HQ0	510 aa	Predicted RBP	22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	PSKH2	Q96QS6	385 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	HEPH	Q9BQS7	1158 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	KCNH6	Q9H252	994 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	ZDHHC6	Q9H6R6	413 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	CD93	Q9NPY3	652 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	ZSCAN32	Q9NX65	697 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	EVL	Q9UI08	416 aa	Predicted RBP	22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	ATP8A1	Q9Y2Q0	1164 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	TTLL3	Q9Y4R7	772 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	WASF2	Q9Y6W5	498 aa		22.22	■■□□□ 1.15
LTBP4-227	ENST00000600026	C1QTNF3-AMACR	E9PGA6	284 aa		22.21	■■□□□ 1.15
LTBP4-227	ENST00000600026	MID1	O15344	667 aa		22.21	■■□□□ 1.15
LTBP4-227	ENST00000600026	RAD51C	O43502	376 aa		22.21	■■□□□ 1.15
LTBP4-227	ENST00000600026	IL1B	P01584	269 aa		22.21	■■□□□ 1.15
LTBP4-227	ENST00000600026	DNTT	P04053	509 aa		22.21	■■□□□ 1.15
LTBP4-227	ENST00000600026	HLA-DQB2	P05538	268 aa		22.21	■■□□□ 1.15
LTBP4-227	ENST00000600026	ETS1	P14921	441 aa		22.21	■■□□□ 1.15
LTBP4-227	ENST00000600026	GK	P32189	559 aa		22.21	■■□□□ 1.15
LTBP4-227	ENST00000600026	ZBTB16	Q05516	673 aa		22.21	■■□□□ 1.15
LTBP4-227	ENST00000600026	PTK6	Q13882	451 aa		22.21	■■□□□ 1.15
LTBP4-227	ENST00000600026	TRIP13	Q15645	432 aa	Predicted RBP	22.21	■■□□□ 1.15
LTBP4-227	ENST00000600026	POLR1E	Q9GZS1	481 aa	Known RBP	22.21	■■□□□ 1.15
LTBP4-227	ENST00000600026	PABPC3	Q9H361	631 aa	Known RBP	22.21	■■□□□ 1.15
LTBP4-227	ENST00000600026	ASIC3	Q9UHC3	531 aa		22.21	■■□□□ 1.15
LTBP4-227	ENST00000600026	RSPH14	Q9UHP6	348 aa		22.21	■■□□□ 1.15

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms