RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 CXorf40AQ8TE69 158 aa9.94□□□□□ -0.82
VRK3-216ENST00000599342 RFFLQ8WZ73 363 aa9.94□□□□□ -0.82
VRK3-216ENST00000599342 HMCESQ96FZ2 354 aa9.94□□□□□ -0.82
VRK3-216ENST00000599342 BMFQ96LC9 184 aa9.94□□□□□ -0.82
VRK3-216ENST00000599342 LENG8Q96PV6 779 aaPredicted RBP9.94□□□□□ -0.82
VRK3-216ENST00000599342 CNPY3Q9BT09 278 aa9.94□□□□□ -0.82
VRK3-216ENST00000599342 C1QTNF7Q9BXJ2 289 aa9.94□□□□□ -0.82
VRK3-216ENST00000599342 TTYH3Q9C0H2 523 aa9.94□□□□□ -0.82
VRK3-216ENST00000599342 GPR27Q9NS67 375 aa9.94□□□□□ -0.82
VRK3-216ENST00000599342 FZD10Q9ULW2 581 aa9.94□□□□□ -0.82
VRK3-216ENST00000599342 ITM2BQ9Y287 266 aa9.94□□□□□ -0.82
VRK3-216ENST00000599342 AKAP13Q12802 2813 aa9.94□□□□□ -0.82
VRK3-216ENST00000599342 IGF2RP11717 2491 aa9.94□□□□□ -0.82
VRK3-216ENST00000599342 KNL1Q8NG31 2342 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 A0A087WV48 116 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 TCRBV5S1A1TA0A578 114 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 TMCO5BA8MYB1 307 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 RASA4BC9J798 803 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 SCAMP1O15126 338 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 RAD51BO15315 384 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 FGF10O15520 208 aaPredicted RBP9.93□□□□□ -0.82
VRK3-216ENST00000599342 RASA4O43374 803 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 TM7SF2O76062 418 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 CSF2P04141 144 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 CKMT1AP12532 417 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 ATP1A3P13637 1013 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 NME1P15531 152 aaKnown RBP9.93□□□□□ -0.82
VRK3-216ENST00000599342 TNFAIP3P21580 790 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 PSMA2P25787 234 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 HTR7P34969 479 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 ABCG1P45844 678 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 THOP1P52888 689 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 TYRO3Q06418 890 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 PTK2BQ14289 1009 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 FZD2Q14332 565 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 RTP5Q14D33 572 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 NCAPHQ15003 741 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 LRRC73Q5JTD7 316 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 CFAP58Q5T655 872 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 KDM7AQ6ZMT4 941 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 LRRC69Q6ZNQ3 347 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 MCOLN2Q8IZK6 566 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 CACTIN-AS1Q8N1I8 211 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 FAM181AQ8N9Y4 354 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 ZNF548Q8NEK5 533 aaPredicted RBP9.93□□□□□ -0.82
VRK3-216ENST00000599342 ASB12Q8WXK4 309 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 APOLD1Q96LR9 279 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 C1QTNF2Q9BXJ5 285 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 USP29Q9HBJ7 922 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 PARVAQ9NVD7 372 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 NCKIPSDQ9NZQ3 722 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 UBA2Q9UBT2 640 aaPredicted RBP9.93□□□□□ -0.82
VRK3-216ENST00000599342 GGT7Q9UJ14 662 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 MYO6Q9UM54 1294 aa9.93□□□□□ -0.82
VRK3-216ENST00000599342 ADAMTS20P59510 1910 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 WASH4PA8MWX3 477 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 K7ESM1 405 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 RIOK3O14730 519 aaKnown RBP9.92□□□□□ -0.82
VRK3-216ENST00000599342 AREL1O15033 823 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 RRP8O43159 456 aaKnown RBP9.92□□□□□ -0.82
VRK3-216ENST00000599342 AQP9O43315 295 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 NEBLO76041 1014 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 MT-CO3P00414 261 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 GP1BAP07359 652 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 HOXB3P14651 431 aaPredicted RBP9.92□□□□□ -0.82
VRK3-216ENST00000599342 JUNDP17535 347 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 PFN3P60673 137 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 ELP6Q0PNE2 266 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 SERINC3Q13530 473 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 GRM3Q14832 879 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 ASIC2Q16515 512 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 FILIP1LQ4L180 1135 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 PPP1R15BQ5SWA1 713 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 ZCCHC8Q6NZY4 707 aaKnown RBP9.92□□□□□ -0.82
VRK3-216ENST00000599342 APTXQ7Z2E3 356 aaKnown RBP9.92□□□□□ -0.82
VRK3-216ENST00000599342 VPS36Q86VN1 386 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 DNAAF5Q86Y56 855 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 UMODL1-AS1Q8N2C9 162 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 DCBLD1Q8N8Z6 715 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 NETO2Q8NC67 525 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 LMX1AQ8TE12 382 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 BTN2A2Q8WVV5 523 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 BAP1Q92560 729 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 VCPIP1Q96JH7 1222 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 EXOC2Q96KP1 924 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 DEPDC7Q96QD5 511 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 KLF6Q99612 283 aaPredicted RBP9.92□□□□□ -0.82
VRK3-216ENST00000599342 IL12RB2Q99665 862 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 ABCG4Q9H172 646 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 HSD3B7Q9H2F3 369 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 NOL6Q9H6R4 1146 aaKnown RBP9.92□□□□□ -0.82
VRK3-216ENST00000599342 DKK3Q9UBP4 350 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 APOBEC3BQ9UH17 382 aaKnown RBP9.92□□□□□ -0.82
VRK3-216ENST00000599342 AP4E1Q9UPM8 1137 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 MFHAS1Q9Y4C4 1052 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 CSNK1G3Q9Y6M4 447 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 DMXL2Q8TDJ6 3036 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 DOCK9Q9BZ29 2069 aa9.92□□□□□ -0.82
VRK3-216ENST00000599342 TRPM6Q9BX84 2022 aa9.91□□□□□ -0.82
VRK3-216ENST00000599342 ARHGAP42A6NI28 874 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms