RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 CNPP09543 421 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 ZXDBP98169 803 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 BST1Q10588 318 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 CHI3L2Q15782 390 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 GALNTL6Q49A17 601 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 STXBP5Q5T5C0 1151 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 ADGRF1Q5T601 910 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 IL31Q6EBC2 164 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 NUDCD3Q8IVD9 361 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 PLD6Q8N2A8 252 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 SPON2Q9BUD6 331 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 ZBP1Q9H171 429 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 ZNF395Q9H8N7 513 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 ACTR5Q9H9F9 607 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 SLC28A3Q9HAS3 691 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 TRPC7Q9HCX4 862 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 TMEM216Q9P0N5 145 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 SLC12A4Q9UP95 1085 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 CAPN7Q9Y6W3 813 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 TRIOBPQ9H2D6 2365 aa17.23■□□□□ 0.35
SHKBP1-216ENST00000598201 PLIN3O60664 434 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 CLDN11O75508 207 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 AHSGP02765 367 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 ATXN1LP0C7T5 689 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 MBL2P11226 248 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 CA8P35219 290 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 PPM1AP35813 382 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 SERPINB8P50452 374 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 SERPINH1P50454 418 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 PGGT1BP53609 377 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 CTBP1Q13363 440 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 ZNF235Q14590 738 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 GRM3Q14832 879 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 SIRPB2Q5JXA9 342 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 TXNDC8Q6A555 127 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 ZC3HC1Q86WB0 502 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 CNTN4Q8IWV2 1026 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 MICALL1Q8N3F8 863 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 ADAMTS19Q8TE59 1207 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 E2F7Q96AV8 911 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 POLR1EQ9GZS1 481 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 RXFP1Q9HBX9 757 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 HAUS2Q9NVX0 235 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 DCDC2Q9UHG0 476 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 DCTN4Q9UJW0 460 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 TGM5O43548 720 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 PPP3CCP48454 512 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 MPP1Q00013 466 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 IRF9Q00978 393 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 FYB2Q5VWT5 728 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 PPP2R2DQ66LE6 453 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 ARL14EPQ8N8R7 260 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 TIFAQ96CG3 184 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 CHKBQ9Y259 395 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 PCDHB12Q9Y5F1 795 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 USH1CQ9Y6N9 552 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 MIA3Q5JRA6 1907 aa17.22■□□□□ 0.35
SHKBP1-216ENST00000598201 LOC285095A0A1B0GVY8 99 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 BIRC5O15392 142 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 TIMM44O43615 452 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 PROCP04070 461 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 BMPR1AP36894 532 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 TMPRSS15P98073 1019 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 ZCCHC23Q6ZST2 131 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 SPRED2Q7Z698 418 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 NSMCE3Q96MG7 304 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 ZNF599Q96NL3 588 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 GPR22Q99680 433 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 C17orf80Q9BSJ5 609 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 C20orf27Q9GZN8 174 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 RHOJQ9H4E5 214 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 RETREG1Q9H6L5 497 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 RWDD3Q9Y3V2 267 aa17.21■□□□□ 0.35
SHKBP1-216ENST00000598201 A0A096LPK6 155 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 A0A1B0GVM2 712 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 HEATR9A2RTY3 570 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 TCAF2A6NFQ2 919 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 KDELR3O43731 214 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 GREM1O60565 184 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 IL1BP01584 269 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 C2P06681 752 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 RHOCP08134 193 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 TROVE2P10155 538 aaKnown RBP eCLIP17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 CTSAP10619 480 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 RGRP47804 291 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 ZNF177Q13360 481 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 INSCQ1MX18 579 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 FASTKD1Q53R41 847 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 KIAA0930Q6ICG6 404 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 CXorf57Q6NSI4 855 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 CHST9Q7L1S5 443 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 MFSD6LQ8IWD5 586 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 KLHL23Q8NBE8 558 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 KCNK13Q9HB14 408 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 NSMCE4AQ9NXX6 385 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 SLC39A10Q9ULF5 831 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 ILVBLA1L0T0 632 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 CARNS1A5YM72 827 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms