RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 OR13H1Q8NG92 308 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 ZCCHC14Q8WYQ9 949 aaKnown RBP15.29■□□□□ 0.04
LIG1-215ENST00000597901 CELF6Q96J87 481 aaKnown RBP15.29■□□□□ 0.04
LIG1-215ENST00000597901 GDAP1L1Q96MZ0 367 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 NCAPGQ9BPX3 1015 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 SNRNP25Q9BV90 132 aaKnown RBP15.29■□□□□ 0.04
LIG1-215ENST00000597901 C1QTNF2Q9BXJ5 285 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 IFNKQ9P0W0 207 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 SCINQ9Y6U3 715 aa15.29■□□□□ 0.04
LIG1-215ENST00000597901 EPG5Q9HCE0 2579 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 NEMP1O14524 444 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 ENC1O14682 589 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 RAD51BO15315 384 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 INSIG1O15503 277 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 LRCH4O75427 683 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 IGSF6O95976 241 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 TIMP2P16035 220 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 ERCC2P18074 760 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 PAPOLAP51003 745 aaKnown RBP15.28■□□□□ 0.04
LIG1-215ENST00000597901 ACAP1Q15027 740 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 CCDC157Q569K6 752 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 TDRD12Q587J7 1177 aaKnown RBP15.28■□□□□ 0.04
LIG1-215ENST00000597901 GCNT7Q6ZNI0 430 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 Q6ZSR6 202 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 RFX8Q6ZV50 586 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 ABI3BPQ7Z7G0 1075 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 SLC25A45Q8N413 288 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 FAM174AQ8TBP5 190 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 ASB12Q8WXK4 309 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 IQCDQ96DY2 449 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 CNDP2Q96KP4 475 aaKnown RBP15.28■□□□□ 0.04
LIG1-215ENST00000597901 LENG8Q96PV6 779 aaPredicted RBP15.28■□□□□ 0.04
LIG1-215ENST00000597901 CPEB1Q9BZB8 566 aaKnown RBP15.28■□□□□ 0.04
LIG1-215ENST00000597901 LHX3Q9UBR4 397 aa15.28■□□□□ 0.04
LIG1-215ENST00000597901 UBA2Q9UBT2 640 aaPredicted RBP15.28■□□□□ 0.04
LIG1-215ENST00000597901 LUC7L2Q9Y383 392 aaKnown RBP15.28■□□□□ 0.04
LIG1-215ENST00000597901 POM121BA6NF01 834 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 ARHGAP42A6NI28 874 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 AREL1O15033 823 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 PRAMEF11O60813 436 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 ITIH2P19823 946 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 PCK1P35558 622 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 NFKBIBQ15653 356 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 SKOR2Q2VWA4 1001 aaPredicted RBP15.27■□□□□ 0.04
LIG1-215ENST00000597901 BOLA3Q53S33 107 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 PPP6R3Q5H9R7 873 aaPredicted RBP15.27■□□□□ 0.04
LIG1-215ENST00000597901 AFMIDQ63HM1 303 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 VPS36Q86VN1 386 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 ZSCAN30Q86W11 494 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 DCP2Q8IU60 420 aaKnown RBP15.27■□□□□ 0.04
LIG1-215ENST00000597901 HCAR2Q8TDS4 363 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 KLF6Q99612 283 aaPredicted RBP15.27■□□□□ 0.04
LIG1-215ENST00000597901 CALN1Q9BXU9 219 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 PDFQ9HBH1 243 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 CWC15Q9P013 229 aaKnown RBP15.27■□□□□ 0.04
LIG1-215ENST00000597901 DKK3Q9UBP4 350 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 GGT7Q9UJ14 662 aa15.27■□□□□ 0.04
LIG1-215ENST00000597901 DOCK4Q8N1I0 1966 aa15.27■□□□□ 0.03
LIG1-215ENST00000597901 PLXNA2O75051 1894 aa15.27■□□□□ 0.03
LIG1-215ENST00000597901 CHD8Q9HCK8 2581 aa15.27■□□□□ 0.03
LIG1-215ENST00000597901 A0A087X0T9 212 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 SPINT1O43278 529 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 SDC3O75056 442 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 CAPNS1P04632 268 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 C1SP09871 688 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 FAM228BP0C875 321 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 IL1R2P27930 398 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 ZNF135P52742 658 aaPredicted RBP15.26■□□□□ 0.03
LIG1-215ENST00000597901 DNAJC3Q13217 504 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 DHRS13Q6UX07 377 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 MARCH9Q86YJ5 346 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 ARHGAP12Q8IWW6 846 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 SLC22A18ASQ8N1D0 253 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 TSC1Q92574 1164 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 ARHGEF26Q96DR7 871 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 EXOC2Q96KP1 924 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 THAP2Q9H0W7 228 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 SUV39H2Q9H5I1 410 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 ITM2BQ9Y287 266 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 PCDHGA1Q9Y5H4 931 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 CABIN1Q9Y6J0 2220 aa15.26■□□□□ 0.03
LIG1-215ENST00000597901 A6NNZ2 444 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 TRIM38O00635 465 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 FPGTO14772 594 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 BUB1BO60566 1050 aaPredicted RBP15.25■□□□□ 0.03
LIG1-215ENST00000597901 MMP20O60882 483 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 PALMO75781 387 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 GYPCP04921 128 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 CYP1A2P05177 515 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 TCF4P15884 667 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 DGKAP23743 735 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 CASP14P31944 242 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 CSNK1DP48730 415 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 PIGHQ14442 188 aaPredicted RBP15.25■□□□□ 0.03
LIG1-215ENST00000597901 SMAD1Q15797 465 aaKnown RBP15.25■□□□□ 0.03
LIG1-215ENST00000597901 ZNF542PQ5EBM4 170 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 LRRC73Q5JTD7 316 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 CCDC122Q5T0U0 273 aa15.25■□□□□ 0.03
LIG1-215ENST00000597901 ALKBH5Q6P6C2 394 aaKnown RBP15.25■□□□□ 0.03
LIG1-215ENST00000597901 SRLQ86TD4 932 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms