RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 KRBA2Q6ZNG9 492 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 RRAGAQ7L523 313 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 ZFAND4Q86XD8 727 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 DTX1Q86Y01 620 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 PTRH1Q86Y79 214 aaKnown RBP10.3□□□□□ -0.76
TRIM28-210ENST00000597618 CCNJLQ8IV13 435 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 FAM26EQ8N5C1 309 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 CENPTQ96BT3 561 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 CMKLR1Q99788 373 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 C1QTNF7Q9BXJ2 289 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 SIK2Q9H0K1 926 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 LRRN3Q9H3W5 708 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 ZDHHC6Q9H6R6 413 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 FOXJ2Q9P0K8 574 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 SIRPGQ9P1W8 387 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 TUBD1Q9UJT1 453 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 PNMA8BQ9ULN7 279 aaPredicted RBP10.3□□□□□ -0.76
TRIM28-210ENST00000597618 MAN2B2Q9Y2E5 1009 aa10.3□□□□□ -0.76
TRIM28-210ENST00000597618 C16orf96A6NNT2 1141 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.29□□□□□ -0.76
TRIM28-210ENST00000597618 P4HA2O15460 535 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 CELA2BP08218 269 aaPredicted RBP10.29□□□□□ -0.76
TRIM28-210ENST00000597618 ITIH1P19827 911 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 EIF4A3P38919 411 aaKnown RBP10.29□□□□□ -0.76
TRIM28-210ENST00000597618 ABL2P42684 1182 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 HK3P52790 923 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 LRRC63Q05C16 580 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 ZFP36L1Q07352 338 aaKnown RBP10.29□□□□□ -0.76
TRIM28-210ENST00000597618 SLC20A2Q08357 652 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 SKIDA1Q1XH10 827 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 C4orf17Q53FE4 359 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 CARD16Q5EG05 197 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 ACBD5Q5T8D3 534 aaPredicted RBP10.29□□□□□ -0.76
TRIM28-210ENST00000597618 TMEM164Q5U3C3 297 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 LRRC31Q6UY01 552 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 TFAP2DQ7Z6R9 452 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 VPS36Q86VN1 386 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 GKN2Q86XP6 184 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 USP7Q93009 1102 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 CCDC34Q96HJ3 373 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 B3GNT4Q9C0J1 378 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 RMND1Q9NWS8 449 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 GGT7Q9UJ14 662 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 ANAPC2Q9UJX6 822 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 GPR34Q9UPC5 381 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 CNTN6Q9UQ52 1028 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 ITM2BQ9Y287 266 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 CREBBPQ92793 2442 aa10.29□□□□□ -0.76
TRIM28-210ENST00000597618 ILVBLA1L0T0 632 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 C9orf172C9J069 976 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 STMND1H3BQB6 276 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 THAP12O43422 761 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 DAB1O75553 588 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 GRAP2O75791 330 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 LETM1O95202 739 aaPredicted RBP10.28□□□□□ -0.76
TRIM28-210ENST00000597618 RASGRP1O95267 797 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 CTSEP14091 401 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 GNA15P30679 374 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 OR1E1P30953 314 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 PRCPP42785 496 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 ATP1A2P50993 1020 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 MAPK10P53779 464 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 POLE2P56282 527 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 COBLL1Q53SF7 1204 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 ZNF805Q5CZA5 627 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 BRMS1LQ5PSV4 323 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 ANKRD40Q6AI12 368 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 HID1Q8IV36 788 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 ARHGEF19Q8IW93 802 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 PLPP6Q8IY26 295 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 ZNF683Q8IZ20 524 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 OR7D4Q8NG98 312 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 LMO3Q8TAP4 145 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 ZNF606Q8WXB4 792 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 SPATA32Q96LK8 384 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 KREMEN1Q96MU8 473 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 PSMG3-AS1Q96PY0 264 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 SPON2Q9BUD6 331 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 EDEM3Q9BZQ6 932 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 TKTL2Q9H0I9 626 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 WDCPQ9H6R7 721 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 ATP13A1Q9HD20 1204 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 ARHGEF38Q9NXL2 777 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 AKAP7Q9P0M2 348 aaPredicted RBP10.28□□□□□ -0.76
TRIM28-210ENST00000597618 HECAQ9UBI9 543 aaPredicted RBP10.28□□□□□ -0.76
TRIM28-210ENST00000597618 APPL1Q9UKG1 709 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 FCF1Q9Y324 198 aaKnown RBP10.28□□□□□ -0.76
TRIM28-210ENST00000597618 PAXBP1Q9Y5B6 917 aa10.28□□□□□ -0.76
TRIM28-210ENST00000597618 SPENQ96T58 3664 aaKnown RBP10.27□□□□□ -0.76
TRIM28-210ENST00000597618 TEP1Q99973 2627 aaKnown RBP10.27□□□□□ -0.76
TRIM28-210ENST00000597618 IGLV3-10A0A075B6K4 115 aa10.27□□□□□ -0.77
TRIM28-210ENST00000597618 CXorf51AA0A1B0GTR3 108 aa10.27□□□□□ -0.77
TRIM28-210ENST00000597618 DRGXA6NNA5 263 aa10.27□□□□□ -0.77
TRIM28-210ENST00000597618 TMEM110-MUSTN1A8MSY1 372 aa10.27□□□□□ -0.77
TRIM28-210ENST00000597618 AREL1O15033 823 aa10.27□□□□□ -0.77
TRIM28-210ENST00000597618 ZMPSTE24O75844 475 aa10.27□□□□□ -0.77
TRIM28-210ENST00000597618 TM7SF2O76062 418 aa10.27□□□□□ -0.77
TRIM28-210ENST00000597618 PNLIPP16233 465 aa10.27□□□□□ -0.77
TRIM28-210ENST00000597618 GLB1P16278 677 aa10.27□□□□□ -0.77
TRIM28-210ENST00000597618 HTR1BP28222 390 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms