RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 CNDP2Q96KP4 475 aaKnown RBP18.19■□□□□ 0.5
CHMP2A-203ENST00000597209 KLHL32Q96NJ5 620 aa18.19■□□□□ 0.5
CHMP2A-203ENST00000597209 GPR27Q9NS67 375 aa18.19■□□□□ 0.5
CHMP2A-203ENST00000597209 DKK3Q9UBP4 350 aa18.19■□□□□ 0.5
CHMP2A-203ENST00000597209 PLXNB3Q9ULL4 1909 aa18.19■□□□□ 0.5
CHMP2A-203ENST00000597209 GOLGA8CPA6NN73 597 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 A6NNZ2 444 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 EEF2KO00418 725 aaKnown RBP18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 UGT2B4P06133 528 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 SKILP12757 684 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 MIPP30301 263 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 HCAR3P49019 387 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 UBASH3AP57075 661 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 RHOAP61586 193 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 FGL2Q14314 439 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 CYTH1Q15438 398 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 CA9Q16790 459 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 ATXN7L2Q5T6C5 722 aaPredicted RBP18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 KYAT3Q6YP21 454 aaKnown RBP18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 DNAAF5Q86Y56 855 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 HCAR2Q8TDS4 363 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 ZNF653Q96CK0 615 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 BMFQ96LC9 184 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 PEBP4Q96S96 227 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 MYOCQ99972 504 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 SNRNP25Q9BV90 132 aaKnown RBP18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 DHX35Q9H5Z1 703 aaKnown RBP18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 PDFQ9HBH1 243 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 FZD3Q9NPG1 666 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 GPATCH2LQ9NWQ4 482 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 AKAP13Q12802 2813 aa18.18■□□□□ 0.5
CHMP2A-203ENST00000597209 FRYQ5TBA9 3013 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 TRPM6Q9BX84 2022 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 ARHGAP42A6NI28 874 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 AREL1O15033 823 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 PRPSAP2O60256 369 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 PRAMEF11O60813 436 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 LRCH4O75427 683 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 PAK4O96013 591 aaPredicted RBP18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 PCK1P35558 622 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 SUOXP51687 545 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 SGCGQ13326 291 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 GRM3Q14832 879 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 AFMIDQ63HM1 303 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 RFX8Q6ZV50 586 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 CYP4V2Q6ZWL3 525 aaPredicted RBP18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 TMPRSS12Q86WS5 348 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 DENND6BQ8NEG7 585 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 KCTD15Q96SI1 283 aaPredicted RBP18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 KLF6Q99612 283 aaPredicted RBP18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 TRIM7Q9C029 511 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 LHX3Q9UBR4 397 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 UBA2Q9UBT2 640 aaPredicted RBP18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 PCSK1NQ9UHG2 260 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 CAPN11Q9UMQ6 739 aa18.17■□□□□ 0.5
CHMP2A-203ENST00000597209 IGLON5A6NGN9 336 aa18.16■□□□□ 0.5
CHMP2A-203ENST00000597209 GOLGA6L19H0YKK7 550 aa18.16■□□□□ 0.5
CHMP2A-203ENST00000597209 SPINT1O43278 529 aa18.16■□□□□ 0.5
CHMP2A-203ENST00000597209 RFPL3O75679 317 aa18.16■□□□□ 0.5
CHMP2A-203ENST00000597209 CLDN2P57739 230 aa18.16■□□□□ 0.5
CHMP2A-203ENST00000597209 ZBED6P86452 979 aa18.16■□□□□ 0.5
CHMP2A-203ENST00000597209 ILKQ13418 452 aa18.16■□□□□ 0.5
CHMP2A-203ENST00000597209 Q6ZSR6 202 aa18.16■□□□□ 0.5
CHMP2A-203ENST00000597209 VPS36Q86VN1 386 aa18.16■□□□□ 0.5
CHMP2A-203ENST00000597209 SLC22A18ASQ8N1D0 253 aa18.16■□□□□ 0.5
CHMP2A-203ENST00000597209 CALN1Q9BXU9 219 aa18.16■□□□□ 0.5
CHMP2A-203ENST00000597209 SLC39A8Q9C0K1 460 aa18.16■□□□□ 0.5
CHMP2A-203ENST00000597209 POM121BA6NF01 834 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 NEMP1O14524 444 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 FPGTO14772 594 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 RAD51BO15315 384 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 DAPK3O43293 454 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 SERPING1P05155 500 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 ERCC2P18074 760 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 DGKAP23743 735 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 RABIFP47224 123 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 CSNK1DP48730 415 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 ACADVLP49748 655 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 PAPOLAP51003 745 aaKnown RBP18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 DNAJC3Q13217 504 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 ZNF211Q13398 564 aaPredicted RBP18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 PROX2Q3B8N5 592 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 BOLA3Q53S33 107 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 TDRD12Q587J7 1177 aaKnown RBP18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 TTC7BQ86TV6 843 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 SLC25A45Q8N413 288 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 LZTR1Q8N653 840 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 MYO1AQ9UBC5 1043 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 GGT7Q9UJ14 662 aa18.15■□□□□ 0.5
CHMP2A-203ENST00000597209 SPTY2D1-AS1A0A0U1RR47 76 aa18.14■□□□□ 0.49
CHMP2A-203ENST00000597209 TSPAN11A1L157 253 aa18.14■□□□□ 0.49
CHMP2A-203ENST00000597209 SRRM3A6NNA2 597 aaPredicted RBP18.14■□□□□ 0.49
CHMP2A-203ENST00000597209 J3KR12 359 aa18.14■□□□□ 0.49
CHMP2A-203ENST00000597209 PIAS2O75928 621 aa18.14■□□□□ 0.49
CHMP2A-203ENST00000597209 TIMP2P16035 220 aa18.14■□□□□ 0.49
CHMP2A-203ENST00000597209 CKMT2P17540 419 aa18.14■□□□□ 0.49
CHMP2A-203ENST00000597209 ACP1P24666 158 aa18.14■□□□□ 0.49
CHMP2A-203ENST00000597209 CAMK2BQ13554 666 aa18.14■□□□□ 0.49
CHMP2A-203ENST00000597209 PIGHQ14442 188 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms