RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 KLHL32Q96NJ5 620 aa15.7■□□□□ 0.1
SMCO4-206ENST00000596676 NUDCD1Q96RS6 583 aa15.7■□□□□ 0.1
SMCO4-206ENST00000596676 RBM15Q96T37 977 aaKnown RBP eCLIP15.7■□□□□ 0.1
SMCO4-206ENST00000596676 GORASP1Q9BQQ3 440 aa15.7■□□□□ 0.1
SMCO4-206ENST00000596676 GLOD4Q9HC38 313 aa15.7■□□□□ 0.1
SMCO4-206ENST00000596676 SCUBE2Q9NQ36 999 aa15.7■□□□□ 0.1
SMCO4-206ENST00000596676 KLHL8Q9P2G9 620 aaPredicted RBP15.7■□□□□ 0.1
SMCO4-206ENST00000596676 NUMA1Q14980 2115 aa15.7■□□□□ 0.1
SMCO4-206ENST00000596676 A0A1W2PP55 124 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 KPNA3O00505 521 aaPredicted RBP15.69■□□□□ 0.1
SMCO4-206ENST00000596676 NEBLO76041 1014 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 PRKCGP05129 697 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 SP9P0CG40 484 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 DRD3P35462 400 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 CD86P42081 329 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 CSNK1DP48730 415 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 NSUN2Q08J23 767 aaKnown RBP eCLIP15.69■□□□□ 0.1
SMCO4-206ENST00000596676 TRAF2Q12933 501 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 LRRC73Q5JTD7 316 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 ANKRD20A2Q5SQ80 823 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 ANKRD20A1Q5TYW2 823 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 ANKRD20A3Q5VUR7 823 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 METTL3Q86U44 580 aaKnown RBP15.69■□□□□ 0.1
SMCO4-206ENST00000596676 PRPF39Q86UA1 669 aaKnown RBP15.69■□□□□ 0.1
SMCO4-206ENST00000596676 BBS5Q8N3I7 341 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 PRCCQ92733 491 aaPredicted RBP15.69■□□□□ 0.1
SMCO4-206ENST00000596676 CCDC114Q96M63 670 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 SMIM14Q96QK8 99 aa15.69■□□□□ 0.1
SMCO4-206ENST00000596676 FARP1Q9Y4F1 1045 aaPredicted RBP15.69■□□□□ 0.1
SMCO4-206ENST00000596676 AXIN1O15169 862 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 GALR2O43603 387 aaPredicted RBP15.68■□□□□ 0.1
SMCO4-206ENST00000596676 RNASEH1O60930 286 aaKnown RBP15.68■□□□□ 0.1
SMCO4-206ENST00000596676 ALDH1A2O94788 518 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 METTL18O95568 372 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 MT-CYBP00156 380 aaPredicted RBP15.68■□□□□ 0.1
SMCO4-206ENST00000596676 IFNB1P01574 187 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 DNTTP04053 509 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 COILP38432 576 aaPredicted RBP15.68■□□□□ 0.1
SMCO4-206ENST00000596676 MRPS25P82663 173 aaKnown RBP15.68■□□□□ 0.1
SMCO4-206ENST00000596676 SKOR1P84550 965 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 SEMG2Q02383 582 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 TRIP13Q15645 432 aaPredicted RBP15.68■□□□□ 0.1
SMCO4-206ENST00000596676 FAXCQ5TGI0 409 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 GDPD4Q6W3E5 623 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.68■□□□□ 0.1
SMCO4-206ENST00000596676 PARS2Q7L3T8 475 aaKnown RBP15.68■□□□□ 0.1
SMCO4-206ENST00000596676 KDELC2Q7Z4H8 507 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 HDDC3Q8N4P3 179 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 CAMKK1Q8N5S9 505 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 TMIEQ8NEW7 156 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 OXNAD1Q96HP4 312 aaPredicted RBP15.68■□□□□ 0.1
SMCO4-206ENST00000596676 POLR1EQ9GZS1 481 aaKnown RBP15.68■□□□□ 0.1
SMCO4-206ENST00000596676 DDX47Q9H0S4 455 aaKnown RBP15.68■□□□□ 0.1
SMCO4-206ENST00000596676 NEUROG2Q9H2A3 272 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 PABPC3Q9H361 631 aaKnown RBP15.68■□□□□ 0.1
SMCO4-206ENST00000596676 CYP8B1Q9UNU6 501 aa15.68■□□□□ 0.1
SMCO4-206ENST00000596676 C5orf60A6NFR6 353 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 ESPNB1AK53 854 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 ALOX15BO15296 676 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 MTSS1O43312 755 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 PHF2O75151 1096 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 PRNPP04156 253 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 ITGAVP06756 1048 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 PDHA1P08559 390 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 PSMB4P28070 264 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 HSPA9P38646 679 aaKnown RBP15.67■□□□□ 0.1
SMCO4-206ENST00000596676 TPMTP51580 245 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 CNTN1Q12860 1018 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 OLIG2Q13516 323 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 CYP1B1Q16678 543 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 SYCP2LQ5T4T6 812 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 ALG1LQ6GMV1 187 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 KLHL7Q8IXQ5 586 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 DEFB119Q8N690 84 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 PRSS33Q8NF86 280 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 GANCQ8TET4 914 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 IMP4Q96G21 291 aaKnown RBP15.67■□□□□ 0.1
SMCO4-206ENST00000596676 SPATA13Q96N96 652 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 NAP1L3Q99457 506 aaPredicted RBP15.67■□□□□ 0.1
SMCO4-206ENST00000596676 FRMD8P1Q9BZ68 369 aaPredicted RBP15.67■□□□□ 0.1
SMCO4-206ENST00000596676 CPEB1Q9BZB8 566 aaKnown RBP15.67■□□□□ 0.1
SMCO4-206ENST00000596676 SLC25A51Q9H1U9 297 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 SUV39H2Q9H5I1 410 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 ITM2CQ9NQX7 267 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 FBXL12Q9NXK8 326 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 RSPH14Q9UHP6 348 aa15.67■□□□□ 0.1
SMCO4-206ENST00000596676 MBD1Q9UIS9 605 aaPredicted RBP15.67■□□□□ 0.1
SMCO4-206ENST00000596676 DRG1Q9Y295 367 aaKnown RBP15.67■□□□□ 0.1
SMCO4-206ENST00000596676 A0A0U1RQS6 177 aa15.66■□□□□ 0.1
SMCO4-206ENST00000596676 C16orf96A6NNT2 1141 aa15.66■□□□□ 0.1
SMCO4-206ENST00000596676 H0Y858 1186 aa15.66■□□□□ 0.1
SMCO4-206ENST00000596676 TRAFD1O14545 582 aaPredicted RBP15.66■□□□□ 0.1
SMCO4-206ENST00000596676 PMPCBO75439 489 aa15.66■□□□□ 0.1
SMCO4-206ENST00000596676 GCATO75600 419 aa15.66■□□□□ 0.1
SMCO4-206ENST00000596676 RNASEH2AO75792 299 aaKnown RBP15.66■□□□□ 0.1
SMCO4-206ENST00000596676 ADH1BP00325 375 aa15.66■□□□□ 0.1
SMCO4-206ENST00000596676 ACADMP11310 421 aa15.66■□□□□ 0.1
SMCO4-206ENST00000596676 TIMP2P16035 220 aa15.66■□□□□ 0.1
SMCO4-206ENST00000596676 BCKDHBP21953 392 aa15.66■□□□□ 0.1
SMCO4-206ENST00000596676 RPL22P35268 128 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms