RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 ZNHIT6Q9NWK9 470 aaKnown RBP13.24□□□□□ -0.29
USE1-207ENST00000596136 DKK3Q9UBP4 350 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 UBA2Q9UBT2 640 aaPredicted RBP13.24□□□□□ -0.29
USE1-207ENST00000596136 LCMT1Q9UIC8 334 aa13.24□□□□□ -0.29
USE1-207ENST00000596136 SPAARA0A1B0GVQ0 90 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 H3BRJ5 948 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 KRIT1O00522 736 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 AREL1O15033 823 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 SPINT1O43278 529 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 TSPAN6O43657 245 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 MAGEC1O60732 1142 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 UGT2B4P06133 528 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 TPM1P09493 284 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 TMEM253P0C7T8 217 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 IL4RP24394 825 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 ARL4AP40617 200 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 ABL2P42684 1182 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 CCT8P50990 548 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 ARSEP51690 589 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 RPS21P63220 83 aaKnown RBP13.23□□□□□ -0.29
USE1-207ENST00000596136 SIM1P81133 766 aaPredicted RBP13.23□□□□□ -0.29
USE1-207ENST00000596136 IL10RBQ08334 325 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 NSUN2Q08J23 767 aaKnown RBP eCLIP13.23□□□□□ -0.29
USE1-207ENST00000596136 RFTN1Q14699 578 aaPredicted RBP13.23□□□□□ -0.29
USE1-207ENST00000596136 STAT4Q14765 748 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 GRM3Q14832 879 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 SHBQ15464 509 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 TRIP6Q15654 476 aaKnown RBP13.23□□□□□ -0.29
USE1-207ENST00000596136 SMTNL2Q2TAL5 461 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 GDPD4Q6W3E5 623 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 SPATS2Q86XZ4 545 aaKnown RBP13.23□□□□□ -0.29
USE1-207ENST00000596136 RYBPQ8N488 228 aaPredicted RBP13.23□□□□□ -0.29
USE1-207ENST00000596136 FAM174AQ8TBP5 190 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 ZNF564Q8TBZ8 553 aaPredicted RBP13.23□□□□□ -0.29
USE1-207ENST00000596136 KLHL32Q96NJ5 620 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 CSPG4P5Q96PW8 444 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 C1QTNF2Q9BXJ5 285 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 PACSIN1Q9BY11 444 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 SLC17A9Q9BYT1 436 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 PCDH18Q9HCL0 1135 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 GDF3Q9NR23 364 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.23□□□□□ -0.29
USE1-207ENST00000596136 ETNK2Q9NVF9 386 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 RCOR3Q9P2K3 495 aaPredicted RBP13.23□□□□□ -0.29
USE1-207ENST00000596136 ANGPTL2Q9UKU9 493 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 HS3ST3A1Q9Y663 406 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 SPEGQ15772 3267 aa13.23□□□□□ -0.29
USE1-207ENST00000596136 TSPAN11A1L157 253 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 SLC31A1O15431 190 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 YKT6O15498 198 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 PROSCO94903 275 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 PCDH8O95206 1070 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 HNRNPA2B1P22626 353 aaKnown RBP13.22□□□□□ -0.29
USE1-207ENST00000596136 AMPD1P23109 780 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 SUOXP51687 545 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 ADKP55263 362 aaKnown RBP13.22□□□□□ -0.29
USE1-207ENST00000596136 FGL2Q14314 439 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 TSR1Q2NL82 804 aaKnown RBP13.22□□□□□ -0.29
USE1-207ENST00000596136 SEL1L3Q68CR1 1132 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 ABI3BPQ7Z7G0 1075 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 CNGA4Q8IV77 575 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 TP53INP2Q8IXH6 220 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 OXR1Q8N573 874 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 NETO2Q8NC67 525 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 SAP25Q8TEE9 199 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 CTNNBL1Q8WYA6 563 aaPredicted RBP13.22□□□□□ -0.29
USE1-207ENST00000596136 HSPH1Q92598 858 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 ZNF641Q96N77 438 aaPredicted RBP13.22□□□□□ -0.29
USE1-207ENST00000596136 ZNF599Q96NL3 588 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 LENG8Q96PV6 779 aaPredicted RBP13.22□□□□□ -0.29
USE1-207ENST00000596136 NHEJ1Q9H9Q4 299 aaPredicted RBP13.22□□□□□ -0.29
USE1-207ENST00000596136 GPR27Q9NS67 375 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 IPO11Q9UI26 975 aaKnown RBP13.22□□□□□ -0.29
USE1-207ENST00000596136 BTBD3Q9Y2F9 522 aa13.22□□□□□ -0.29
USE1-207ENST00000596136 EPG5Q9HCE0 2579 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 FAM221BA6H8Z2 402 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 INSIG1O15503 277 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 AKR1B10O60218 316 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 MTA2O94776 668 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 DKK1O94907 266 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 TRIM16O95361 564 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 PEX11BO96011 259 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 TIMP2P16035 220 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 PRLRP16471 622 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 AKT2P31751 481 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 MAN1A1P33908 653 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 GRK6P43250 576 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 TCEAL1Q15170 157 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 HADHQ16836 314 aaKnown RBP13.21□□□□□ -0.29
USE1-207ENST00000596136 TMCO4Q5TGY1 634 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 TMCO3Q6UWJ1 677 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 ARHGAP36Q6ZRI8 547 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 KANSL1Q7Z3B3 1105 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 TSEN2Q8NCE0 465 aaKnown RBP13.21□□□□□ -0.29
USE1-207ENST00000596136 RHBDD1Q8TEB9 315 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 SETD7Q8WTS6 366 aaKnown RBP13.21□□□□□ -0.29
USE1-207ENST00000596136 KLK6Q92876 244 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 KLHDC7BQ96G42 594 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 CCDC42Q96M95 316 aa13.21□□□□□ -0.29
USE1-207ENST00000596136 PSKH2Q96QS6 385 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms