RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 CCDC110Q8TBZ0 833 aa9.4□□□□□ -0.9
ZNF548-203ENST00000594668 GRIN3AQ8TCU5 1115 aa9.4□□□□□ -0.9
ZNF548-203ENST00000594668 MAGOHBQ96A72 148 aaKnown RBP9.4□□□□□ -0.9
ZNF548-203ENST00000594668 ARRDC3Q96B67 414 aa9.4□□□□□ -0.9
ZNF548-203ENST00000594668 SIPA1Q96FS4 1042 aa9.4□□□□□ -0.9
ZNF548-203ENST00000594668 NUDCD1Q96RS6 583 aa9.4□□□□□ -0.9
ZNF548-203ENST00000594668 VAT1Q99536 393 aa9.4□□□□□ -0.9
ZNF548-203ENST00000594668 CPEB1Q9BZB8 566 aaKnown RBP9.4□□□□□ -0.9
ZNF548-203ENST00000594668 POLR1EQ9GZS1 481 aaKnown RBP9.4□□□□□ -0.9
ZNF548-203ENST00000594668 GLOD4Q9HC38 313 aa9.4□□□□□ -0.9
ZNF548-203ENST00000594668 CD93Q9NPY3 652 aa9.4□□□□□ -0.9
ZNF548-203ENST00000594668 SCUBE2Q9NQ36 999 aa9.4□□□□□ -0.9
ZNF548-203ENST00000594668 HOMER3Q9NSC5 361 aa9.4□□□□□ -0.9
ZNF548-203ENST00000594668 RNF14Q9UBS8 474 aa9.4□□□□□ -0.9
ZNF548-203ENST00000594668 AMACRQ9UHK6 382 aa9.4□□□□□ -0.9
ZNF548-203ENST00000594668 FARP1Q9Y4F1 1045 aaPredicted RBP9.4□□□□□ -0.9
ZNF548-203ENST00000594668 CUL9Q8IWT3 2517 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 C5orf60A6NFR6 353 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 ESPNB1AK53 854 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 F5H423 210 aaPredicted RBP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 MID1O15344 667 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 ZNF500O60304 480 aaPredicted RBP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 GCATO75600 419 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 NEBLO76041 1014 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 ALDH1A2O94788 518 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 PRNPP04156 253 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 UGT2B4P06133 528 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 ZSCAN5DPP0CG00 497 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 NFKB1P19838 968 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 STIP1P31948 543 aaKnown RBP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 SLC8A1P32418 973 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 COILP38432 576 aaPredicted RBP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 CD86P42081 329 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 PAFAH1B1P43034 410 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 PSMD8P48556 350 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 FNTBP49356 437 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 SKOR1P84550 965 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 RAD51Q06609 339 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 CST6Q15828 149 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 ZNF776Q68DI1 518 aaPredicted RBP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 KIAA1324Q6UXG2 1013 aaKnown RBP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 GDPD4Q6W3E5 623 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 PRPF39Q86UA1 669 aaKnown RBP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 AADATQ8N5Z0 425 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 FRMD1Q8N878 549 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 ATL2Q8NHH9 583 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 SPATA22Q8NHS9 363 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 KIF18AQ8NI77 898 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 RLN3Q8WXF3 142 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 PRCCQ92733 491 aaPredicted RBP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 RTP4Q96DX8 246 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 IMP4Q96G21 291 aaKnown RBP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 LRIG1Q96JA1 1093 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 CCDC114Q96M63 670 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 SPATA13Q96N96 652 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 KLHL32Q96NJ5 620 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 RBM15Q96T37 977 aaKnown RBP eCLIP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 GORASP1Q9BQQ3 440 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 TPSD1Q9BZJ3 242 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 DDX47Q9H0S4 455 aaKnown RBP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 PABPC3Q9H361 631 aaKnown RBP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 SUV39H2Q9H5I1 410 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 FBRSQ9HAH7 460 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 ITM2CQ9NQX7 267 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 BCCIPQ9P287 314 aaKnown RBP eCLIP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 KLHL8Q9P2G9 620 aaPredicted RBP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 SERGEFQ9UGK8 458 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 CDC23Q9UJX2 597 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 TRHDEQ9UKU6 1024 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 PCDHGC4Q9Y5F7 938 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 TNRC6BQ9UPQ9 1833 aaKnown RBP9.39□□□□□ -0.91
ZNF548-203ENST00000594668 WDFY4Q6ZS81 3184 aa9.39□□□□□ -0.91
ZNF548-203ENST00000594668 A0A1W2PP55 124 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 CFAP69A5D8W1 941 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 C1QTNF3-AMACRE9PGA6 284 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 KPNA3O00505 521 aaPredicted RBP9.38□□□□□ -0.91
ZNF548-203ENST00000594668 TRAFD1O14545 582 aaPredicted RBP9.38□□□□□ -0.91
ZNF548-203ENST00000594668 AXIN1O15169 862 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 GALR2O43603 387 aaPredicted RBP9.38□□□□□ -0.91
ZNF548-203ENST00000594668 RNASEH1O60930 286 aaKnown RBP9.38□□□□□ -0.91
ZNF548-203ENST00000594668 PHF2O75151 1096 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 METTL18O95568 372 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 MT-CYBP00156 380 aaPredicted RBP9.38□□□□□ -0.91
ZNF548-203ENST00000594668 IFNB1P01574 187 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 DNTTP04053 509 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 SP9P0CG40 484 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 C5AR1P21730 350 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 CES1P23141 567 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 HOXA6P31267 233 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 DRD3P35462 400 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 TPMTP51580 245 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 AP1S1P61966 158 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 TRAF2Q12933 501 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 ANGPT1Q15389 498 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 MAP7D1Q3KQU3 841 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 ZNF805Q5CZA5 627 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 RALGPS1Q5JS13 557 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 FAM46CQ5VWP2 391 aa9.38□□□□□ -0.91
ZNF548-203ENST00000594668 CCDC137Q6PK04 289 aaKnown RBP9.38□□□□□ -0.91
ZNF548-203ENST00000594668 DSG4Q86SJ6 1040 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms