RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 GPR27Q9NS67 375 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 HECAQ9UBI9 543 aaPredicted RBP14.99□□□□□ -0.01
PNKP-202ENST00000593706 U3KQA8 63 aa14.99□□□□□ -0.01
PNKP-202ENST00000593706 KLK10O43240 276 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 ZNF821O75541 412 aaPredicted RBP14.98□□□□□ -0.01
PNKP-202ENST00000593706 ZMPSTE24O75844 475 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 DXOO77932 396 aaKnown RBP14.98□□□□□ -0.01
PNKP-202ENST00000593706 PLA2G2AP14555 144 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 JUNDP17535 347 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 SOX5P35711 763 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 ETFBP38117 255 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 THOP1P52888 689 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 ATP11AP98196 1134 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 CFHR1Q03591 330 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 CDO1Q16878 200 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 ANO6Q4KMQ2 910 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 FKBP15Q5T1M5 1219 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 ARHGAP40Q5TG30 622 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 CAVIN1Q6NZI2 390 aaKnown RBP14.98□□□□□ -0.01
PNKP-202ENST00000593706 GUSBP11Q6P575 273 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 EFL1Q7Z2Z2 1120 aaKnown RBP14.98□□□□□ -0.01
PNKP-202ENST00000593706 BNIPLQ7Z465 357 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 LMX1AQ8TE12 382 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 IL12RB2Q99665 862 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 ZNF212Q9UDV6 495 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 SATB2Q9UPW6 733 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 ITM2BQ9Y287 266 aa14.98□□□□□ -0.01
PNKP-202ENST00000593706 IGLON5A6NGN9 336 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 C16orf96A6NNT2 1141 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 KRIT1O00522 736 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 TSPAN6O43657 245 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 GFPT2O94808 682 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 CYP1A1P04798 512 aaPredicted RBP14.97□□□□□ -0.01
PNKP-202ENST00000593706 TPM2P07951 284 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 TGM2P21980 687 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 RBMS1P29558 406 aaKnown RBP14.97□□□□□ -0.01
PNKP-202ENST00000593706 GKP32189 559 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 ABL2P42684 1182 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 GEMIN4P57678 1058 aaKnown RBP14.97□□□□□ -0.01
PNKP-202ENST00000593706 FMO1Q01740 532 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 CDR2Q01850 454 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 RHDQ02161 417 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 POLD3Q15054 466 aaPredicted RBP14.97□□□□□ -0.01
PNKP-202ENST00000593706 NR0B2Q15466 257 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 ISXQ2M1V0 245 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 ARTNQ5T4W7 220 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 TRNP1Q6NT89 227 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 RWDD4Q6NW29 188 aaKnown RBP14.97□□□□□ -0.01
PNKP-202ENST00000593706 CRTC1Q6UUV9 634 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 ZNF677Q86XU0 584 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 ZNF354CQ86Y25 554 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 DENND6BQ8NEG7 585 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 BTN2A2Q8WVV5 523 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 RAB7BQ96AH8 199 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 ARHGEF26Q96DR7 871 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 VCPIP1Q96JH7 1222 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 SYNDIG1Q9H7V2 258 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 NLRC4Q9NPP4 1024 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 ASCL3Q9NQ33 180 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 METTL5Q9NRN9 209 aaKnown RBP14.97□□□□□ -0.01
PNKP-202ENST00000593706 APOBEC3BQ9UH17 382 aaKnown RBP14.97□□□□□ -0.01
PNKP-202ENST00000593706 GGT7Q9UJ14 662 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 HPCAL4Q9UM19 191 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 ACTL7AQ9Y615 435 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 CSNK1G3Q9Y6M4 447 aa14.97□□□□□ -0.01
PNKP-202ENST00000593706 ARHGEF17Q96PE2 2063 aaPredicted RBP14.96□□□□□ -0.01
PNKP-202ENST00000593706 CAPN8A6NHC0 703 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 RIOK3O14730 519 aaKnown RBP14.96□□□□□ -0.01
PNKP-202ENST00000593706 UGT2B4P06133 528 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 ACVRL1P37023 503 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 UBXN1Q04323 297 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 ARL13BQ3SXY8 428 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 ZNF805Q5CZA5 627 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 NAA35Q5VZE5 725 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 FOXR1Q6PIV2 292 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 RBM44Q6ZP01 1051 aaKnown RBP14.96□□□□□ -0.01
PNKP-202ENST00000593706 RBFAQ8N0V3 343 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 EMC1Q8N766 993 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 OR2AP1Q8NGE2 309 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 CPA5Q8WXQ8 436 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 GLMNQ92990 594 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 ISG20Q96AZ6 181 aaKnown RBP14.96□□□□□ -0.01
PNKP-202ENST00000593706 ATXN7L3BQ96GX2 97 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 LENG8Q96PV6 779 aaPredicted RBP14.96□□□□□ -0.01
PNKP-202ENST00000593706 KLF6Q99612 283 aaPredicted RBP14.96□□□□□ -0.01
PNKP-202ENST00000593706 C1QTNF2Q9BXJ5 285 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 DPH1Q9BZG8 443 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 PPARGC1AQ9UBK2 798 aaKnown RBP14.96□□□□□ -0.01
PNKP-202ENST00000593706 SPASTQ9UBP0 616 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 OR12D3Q9UGF7 316 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 DNAI1Q9UI46 699 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 KLF15Q9UIH9 416 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 TMEM59LQ9UK28 342 aa14.96□□□□□ -0.01
PNKP-202ENST00000593706 AHCTF1Q8WYP5 2266 aa14.95□□□□□ -0.02
PNKP-202ENST00000593706 MUSKO15146 869 aa14.95□□□□□ -0.02
PNKP-202ENST00000593706 SPINT1O43278 529 aa14.95□□□□□ -0.02
PNKP-202ENST00000593706 MMP8P22894 467 aa14.95□□□□□ -0.02
PNKP-202ENST00000593706 MAPKAPK2P49137 400 aa14.95□□□□□ -0.02
PNKP-202ENST00000593706 RPIAP49247 311 aa14.95□□□□□ -0.02
PNKP-202ENST00000593706 SNRPD1P62314 119 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms