RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 VCPIP1Q96JH7 1222 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 TMEM248Q9NWD8 314 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 SALL4Q9UJQ4 1053 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 NOCTQ9UK39 431 aaKnown RBP16.61■□□□□ 0.25
LIG1-205ENST00000593425 ENTPD2Q9Y5L3 495 aa16.61■□□□□ 0.25
LIG1-205ENST00000593425 CXorf51AA0A1B0GTR3 108 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 PMS2P1A4D2B8 440 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 EME2A4GXA9 379 aaPredicted RBP16.6■□□□□ 0.25
LIG1-205ENST00000593425 KRIT1O00522 736 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 PES1O00541 588 aaKnown RBP16.6■□□□□ 0.25
LIG1-205ENST00000593425 NEMP1O14524 444 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 GCATO75600 419 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 LRIG2O94898 1065 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 GSRP00390 522 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 RHOQP17081 205 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 ADRA1BP35368 520 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 ETFBP38117 255 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 MAPKAPK2P49137 400 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 TMPRSS3P57727 454 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 CFHR1Q03591 330 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 C1QBPQ07021 282 aaKnown RBP16.6■□□□□ 0.25
LIG1-205ENST00000593425 CCDC14Q49A88 953 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 ATXN7L2Q5T6C5 722 aaPredicted RBP16.6■□□□□ 0.25
LIG1-205ENST00000593425 ARHGAP40Q5TG30 622 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 BROXQ5VW32 411 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 CCDC185Q8N715 623 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 JOSD2Q8TAC2 188 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 RXFP2Q8WXD0 754 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 ASB12Q8WXK4 309 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 CENPTQ96BT3 561 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 ATXN7L3BQ96GX2 97 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 KLHL32Q96NJ5 620 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 THSD1Q9NS62 852 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 APOBEC3BQ9UH17 382 aaKnown RBP16.6■□□□□ 0.25
LIG1-205ENST00000593425 GTF3C3Q9Y5Q9 886 aa16.6■□□□□ 0.25
LIG1-205ENST00000593425 LRP4O75096 1905 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 LRRK1Q38SD2 2015 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 ERVH48-1M5A8F1 160 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 AREL1O15033 823 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 KLK10O43240 276 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 ITIH2P19823 946 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 SDC4P31431 198 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 SNRPD1P62314 119 aaKnown RBP16.59■□□□□ 0.25
LIG1-205ENST00000593425 C1orf61Q13536 156 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 NR0B2Q15466 257 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 ARL13BQ3SXY8 428 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 VPS36Q86VN1 386 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 SLC35F3Q8IY50 421 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 PHACTR4Q8IZ21 702 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 NETO2Q8NC67 525 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 GPT2Q8TD30 523 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 PRR11Q96HE9 360 aaPredicted RBP16.59■□□□□ 0.25
LIG1-205ENST00000593425 IL12RB2Q99665 862 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 C11orf70Q9BRQ4 267 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.59■□□□□ 0.25
LIG1-205ENST00000593425 LRRC61Q9BV99 259 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 BOCQ9BWV1 1114 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 STK33Q9BYT3 514 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 GANQ9H2C0 597 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 SAMSN1Q9NSI8 373 aaKnown RBP16.59■□□□□ 0.25
LIG1-205ENST00000593425 SPASTQ9UBP0 616 aa16.59■□□□□ 0.25
LIG1-205ENST00000593425 C2CD4BA6NLJ0 364 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 TPP1O14773 563 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 MUSKO15146 869 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 MMP20O60882 483 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 RAMP2O60895 175 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 GFPT2O94808 682 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 CYP1A1P04798 512 aaPredicted RBP16.58■□□□□ 0.24
LIG1-205ENST00000593425 CHRNB2P17787 502 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 MMP8P22894 467 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 THOP1P52888 689 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 PDX1P52945 283 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 UCNP55089 124 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 ADKP55263 362 aaKnown RBP16.58■□□□□ 0.24
LIG1-205ENST00000593425 HDAC4P56524 1084 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 GEMIN4P57678 1058 aaKnown RBP16.58■□□□□ 0.24
LIG1-205ENST00000593425 FMO1Q01740 532 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 POLD3Q15054 466 aaPredicted RBP16.58■□□□□ 0.24
LIG1-205ENST00000593425 MYLK3Q32MK0 819 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 TAF1BQ53T94 588 aaPredicted RBP16.58■□□□□ 0.24
LIG1-205ENST00000593425 PRRT3Q5FWE3 981 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 C6orf132Q5T0Z8 1188 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 IGF2-ASQ6U949 168 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 RBM44Q6ZP01 1051 aaKnown RBP16.58■□□□□ 0.24
LIG1-205ENST00000593425 ZNF605Q86T29 641 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 TP53I13Q8NBR0 393 aaPredicted RBP16.58■□□□□ 0.24
LIG1-205ENST00000593425 SLC30A5Q8TAD4 765 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 BTN2A2Q8WVV5 523 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 TBC1D31Q96DN5 1066 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 OSBPL1AQ9BXW6 950 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 MAGEH1Q9H213 219 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 CLSTN2Q9H4D0 955 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 MBNL1Q9NR56 388 aaKnown RBP16.58■□□□□ 0.24
LIG1-205ENST00000593425 TAB2Q9NYJ8 693 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 NCKIPSDQ9NZQ3 722 aa16.58■□□□□ 0.24
LIG1-205ENST00000593425 RP1P56715 2156 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 KIF26BQ2KJY2 2108 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 KDELR3O43731 214 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 TMCC1O94876 653 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 POP4O95707 220 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms