RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 BAP1Q92560 729 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 NTAN1Q96AB6 310 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 LENG8Q96PV6 779 aaPredicted RBP20.78■□□□□ 0.92
TRIM47-207ENST00000593089 DUSP23Q9BVJ7 150 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 DAAM1Q9Y4D1 1078 aa20.78■□□□□ 0.92
TRIM47-207ENST00000593089 LY6G6EA0A0G2JKS1 128 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 EIF4E1BA6NMX2 242 aaKnown RBP20.77■□□□□ 0.92
TRIM47-207ENST00000593089 SPINT1O43278 529 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 POP4O95707 220 aaKnown RBP20.77■□□□□ 0.92
TRIM47-207ENST00000593089 CALB1P05937 261 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 ACTN2P35609 894 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 DUSP3P51452 185 aaPredicted RBP20.77■□□□□ 0.92
TRIM47-207ENST00000593089 COPB1P53618 953 aaKnown RBP20.77■□□□□ 0.92
TRIM47-207ENST00000593089 GSCP56915 257 aaPredicted RBP20.77■□□□□ 0.92
TRIM47-207ENST00000593089 SCYL2Q6P3W7 929 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 PHF13Q86YI8 300 aaPredicted RBP20.77■□□□□ 0.92
TRIM47-207ENST00000593089 FAM181AQ8N9Y4 354 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 NETO2Q8NC67 525 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 C3orf20Q8ND61 904 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 NEK11Q8NG66 645 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 SNIP1Q8TAD8 396 aaKnown RBP20.77■□□□□ 0.92
TRIM47-207ENST00000593089 FGF11Q92914 225 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 VOPP1Q96AW1 172 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 OSBPL1AQ9BXW6 950 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 EVA1BQ9NVM1 165 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 KLF15Q9UIH9 416 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 U3KQA8 63 aa20.77■□□□□ 0.92
TRIM47-207ENST00000593089 CCP110O43303 1012 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 TMCC1O94876 653 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 JUNDP17535 347 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 EPHB2P29323 1055 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 EFHC2Q5JST6 749 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 CDCP2Q5VXM1 449 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 GDPD4Q6W3E5 623 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 TTC7BQ86TV6 843 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 DENND6BQ8NEG7 585 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 IFI44Q8TCB0 444 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 LMX1AQ8TE12 382 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 ASB12Q8WXK4 309 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 ARHGEF26Q96DR7 871 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 GDAP1L1Q96MZ0 367 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 DEPDC7Q96QD5 511 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 ABCG4Q9H172 646 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 NOL6Q9H6R4 1146 aaKnown RBP20.76■□□□□ 0.91
TRIM47-207ENST00000593089 USP29Q9HBJ7 922 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 RAI2Q9Y5P3 530 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 SHROOM3Q8TF72 1996 aa20.76■□□□□ 0.91
TRIM47-207ENST00000593089 ZSCAN5CA6NGD5 496 aaPredicted RBP20.75■□□□□ 0.91
TRIM47-207ENST00000593089 SIGLEC16A6NMB1 481 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 AQP9O43315 295 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 CREB3O43889 395 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 GP1BAP07359 652 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 PFN3P60673 137 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 RHOAP61586 193 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 CCDC173Q0VFZ6 552 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 CDKN3Q16667 212 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 DEFB133Q30KQ1 61 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 TBC1D25Q3MII6 688 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 ZCCHC8Q6NZY4 707 aaKnown RBP20.75■□□□□ 0.91
TRIM47-207ENST00000593089 MON1BQ7L1V2 547 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 VPS36Q86VN1 386 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 RTL3Q8N8U3 475 aaKnown RBP20.75■□□□□ 0.91
TRIM47-207ENST00000593089 MAPK15Q8TD08 544 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 TTYH3Q9C0H2 523 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 KLC2Q9H0B6 622 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 PRORYQ9H606 182 aa20.75■□□□□ 0.91
TRIM47-207ENST00000593089 CPED1A4D0V7 1026 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 AREL1O15033 823 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 MMP20O60882 483 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 CSO75390 466 aaKnown RBP20.74■□□□□ 0.91
TRIM47-207ENST00000593089 IGSF6O95976 241 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 MPOP05164 745 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 ITIH2P19823 946 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 THOP1P52888 689 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 RAD51Q06609 339 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 EIF2B5Q13144 721 aaKnown RBP20.74■□□□□ 0.91
TRIM47-207ENST00000593089 DNAJC24Q6P3W2 148 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 RBFAQ8N0V3 343 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 ANKRD20A12PQ8NF67 263 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 CENPTQ96BT3 561 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 HMCESQ96FZ2 354 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 MCEEQ96PE7 176 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 UBL7Q96S82 380 aaPredicted RBP20.74■□□□□ 0.91
TRIM47-207ENST00000593089 AGPAT1Q99943 283 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 LIMA1Q9UHB6 759 aaKnown RBP20.74■□□□□ 0.91
TRIM47-207ENST00000593089 CSNK1G3Q9Y6M4 447 aa20.74■□□□□ 0.91
TRIM47-207ENST00000593089 FASNP49327 2511 aaKnown RBP20.74■□□□□ 0.91
TRIM47-207ENST00000593089 ANKRD62A6NC57 917 aa20.73■□□□□ 0.91
TRIM47-207ENST00000593089 LGALS16A8MUM7 142 aa20.73■□□□□ 0.91
TRIM47-207ENST00000593089 USP12O75317 370 aa20.73■□□□□ 0.91
TRIM47-207ENST00000593089 TM7SF2O76062 418 aa20.73■□□□□ 0.91
TRIM47-207ENST00000593089 IGFALSP35858 605 aa20.73■□□□□ 0.91
TRIM47-207ENST00000593089 ZNF143P52747 638 aaPredicted RBP20.73■□□□□ 0.91
TRIM47-207ENST00000593089 UBXN1Q04323 297 aa20.73■□□□□ 0.91
TRIM47-207ENST00000593089 RBM43Q6ZSC3 357 aaKnown RBP20.73■□□□□ 0.91
TRIM47-207ENST00000593089 CXorf40AQ8TE69 158 aa20.73■□□□□ 0.91
TRIM47-207ENST00000593089 CASKIN2Q8WXE0 1202 aa20.73■□□□□ 0.91
TRIM47-207ENST00000593089 FCRL3Q96P31 734 aaPredicted RBP20.73■□□□□ 0.91
TRIM47-207ENST00000593089 IL12RB2Q99665 862 aa20.73■□□□□ 0.91
TRIM47-207ENST00000593089 WRAP53Q9BUR4 548 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms