RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 CNPY3Q9BT09 278 aa16.4■□□□□ 0.22
CIRBP-241ENST00000593048 OSBPL1AQ9BXW6 950 aa16.4■□□□□ 0.22
CIRBP-241ENST00000593048 GPSM3Q9Y4H4 160 aa16.4■□□□□ 0.22
CIRBP-241ENST00000593048 PTPRBP23467 1997 aa16.4■□□□□ 0.22
CIRBP-241ENST00000593048 COL5A1P20908 1838 aaPredicted RBP16.4■□□□□ 0.22
CIRBP-241ENST00000593048 NEMP2A6NFY4 417 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 IGLON5A6NGN9 336 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 TMCO5BA8MYB1 307 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 TRIM38O00635 465 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 TMCC1O94876 653 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 IGSF6O95976 241 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 ATP1A3P13637 1013 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 AIF1P55008 147 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 RPL7AP62424 266 aaKnown RBP16.39■□□□□ 0.21
CIRBP-241ENST00000593048 TARDBPQ13148 414 aaKnown RBP eCLIP16.39■□□□□ 0.21
CIRBP-241ENST00000593048 FILIP1LQ4L180 1135 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 ZNF542PQ5EBM4 170 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 ATXN7L2Q5T6C5 722 aaPredicted RBP16.39■□□□□ 0.21
CIRBP-241ENST00000593048 PPP1R2P3Q6NXS1 205 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 GDPD4Q6W3E5 623 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 TTC7BQ86TV6 843 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 MCOLN2Q8IZK6 566 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 HNRNPLLQ8WVV9 542 aaKnown RBP16.39■□□□□ 0.21
CIRBP-241ENST00000593048 NXPE2Q96DL1 559 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 BMFQ96LC9 184 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 GDAP1L1Q96MZ0 367 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 KLHL32Q96NJ5 620 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 HSD3B7Q9H2F3 369 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 UCKL1Q9NWZ5 548 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 FZD10Q9ULW2 581 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 NEU3Q9UQ49 428 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 AK5Q9Y6K8 562 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 NBEAQ8NFP9 2946 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 ACACAQ13085 2346 aa16.39■□□□□ 0.21
CIRBP-241ENST00000593048 TP53BP1Q12888 1972 aaPredicted RBP16.38■□□□□ 0.21
CIRBP-241ENST00000593048 DOCK4Q8N1I0 1966 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 POM121BA6NF01 834 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 ESPNB1AK53 854 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 NRDCO43847 1150 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 PIAS2O75928 621 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 SERPINC1P01008 464 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 ACP1P24666 158 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 ABL2P42684 1182 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 RABIFP47224 123 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 UBASH3AP57075 661 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 YBEYP58557 167 aaPredicted RBP16.38■□□□□ 0.21
CIRBP-241ENST00000593048 RHOAP61586 193 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 HNRNPKP61978 463 aaKnown RBP eCLIP16.38■□□□□ 0.218e-8■□□□□ 10.2
CIRBP-241ENST00000593048 E2F1Q01094 437 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 FGL2Q14314 439 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 PROX2Q3B8N5 592 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 KYAT3Q6YP21 454 aaKnown RBP16.38■□□□□ 0.21
CIRBP-241ENST00000593048 APTXQ7Z2E3 356 aaKnown RBP16.38■□□□□ 0.21
CIRBP-241ENST00000593048 TMC6Q7Z403 805 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 SLC22A18ASQ8N1D0 253 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 OR4C6Q8NH72 309 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 CASKIN2Q8WXE0 1202 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 IFT43Q96FT9 208 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 TTYH3Q9C0H2 523 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 DONSONQ9NYP3 566 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 ZKSCAN5Q9Y2L8 839 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 ITPR1Q14643 2758 aa16.38■□□□□ 0.21
CIRBP-241ENST00000593048 APC2O95996 2303 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 TCRBV5S1A1TA0A578 114 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 RASA4BC9J798 803 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 H3BM21 787 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 RAD51BO15315 384 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 FGF10O15520 208 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-241ENST00000593048 TEX33O43247 280 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 RASA4O43374 803 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 XPAP23025 273 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-241ENST00000593048 MSNP26038 577 aaKnown RBP16.37■□□□□ 0.21
CIRBP-241ENST00000593048 TPI1P60174 286 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 COL28A1Q2UY09 1125 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 PARP15Q460N3 678 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 INO80DQ53TQ3 878 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-241ENST00000593048 IRF2BP2Q7Z5L9 587 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 NETO2Q8NC67 525 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 CXorf40AQ8TE69 158 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 HMCESQ96FZ2 354 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 VCPIP1Q96JH7 1222 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 LENG8Q96PV6 779 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-241ENST00000593048 NCAPGQ9BPX3 1015 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 C1QTNF2Q9BXJ5 285 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 PARVAQ9NVD7 372 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 EVA1BQ9NVM1 165 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 GGT7Q9UJ14 662 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 MYO6Q9UM54 1294 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 CLCA2Q9UQC9 943 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 ITM2BQ9Y287 266 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 CELSR3Q9NYQ7 3312 aa16.37■□□□□ 0.21
CIRBP-241ENST00000593048 LOC400499M0QZD8 3231 aa16.36■□□□□ 0.21
CIRBP-241ENST00000593048 SPTY2D1-AS1A0A0U1RR47 76 aa16.36■□□□□ 0.21
CIRBP-241ENST00000593048 WASH4PA8MWX3 477 aa16.36■□□□□ 0.21
CIRBP-241ENST00000593048 PSMA2P25787 234 aa16.36■□□□□ 0.21
CIRBP-241ENST00000593048 SEMG2Q02383 582 aa16.36■□□□□ 0.21
CIRBP-241ENST00000593048 SERINC3Q13530 473 aa16.36■□□□□ 0.21
CIRBP-241ENST00000593048 PDE1CQ14123 709 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-241ENST00000593048 FZD2Q14332 565 aa16.36■□□□□ 0.21
CIRBP-241ENST00000593048 ASIC2Q16515 512 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms