RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 MX2P20592 715 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 TGM1P22735 817 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 PSMB4P28070 264 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 P2RY2P41231 377 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 MMP13P45452 471 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 RHOAP61586 193 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 IFI35P80217 286 aaPredicted RBP9.78□□□□□ -0.84
DDX39A-220ENST00000593008 CREB5Q02930 508 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 SLC12A1Q13621 1099 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 ZNF235Q14590 738 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 STARD3Q14849 445 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 EIF4HQ15056 248 aaKnown RBP9.78□□□□□ -0.84
DDX39A-220ENST00000593008 PTPRRQ15256 657 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 CCNG2Q16589 344 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 WHAMMP3Q1A5X7 153 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 MAP7D1Q3KQU3 841 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 ACCSLQ4AC99 568 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 LRRC73Q5JTD7 316 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 CCDC137Q6PK04 289 aaKnown RBP9.78□□□□□ -0.84
DDX39A-220ENST00000593008 DPY19L3Q6ZPD9 716 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 MICALCLQ6ZW33 695 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 TMEFF1Q8IYR6 380 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 STK40Q8N2I9 435 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 SPATA22Q8NHS9 363 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 GRIN3AQ8TCU5 1115 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 OXNAD1Q96HP4 312 aaPredicted RBP9.78□□□□□ -0.84
DDX39A-220ENST00000593008 ZC3H10Q96K80 434 aaKnown RBP9.78□□□□□ -0.84
DDX39A-220ENST00000593008 SPACA7Q96KW9 195 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 MRGPRX1Q96LB2 322 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 IL12RB2Q99665 862 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 MLPHQ9BV36 600 aaPredicted RBP9.78□□□□□ -0.84
DDX39A-220ENST00000593008 CINPQ9BW66 212 aaPredicted RBP9.78□□□□□ -0.84
DDX39A-220ENST00000593008 MKRN2Q9H000 416 aaKnown RBP9.78□□□□□ -0.84
DDX39A-220ENST00000593008 TMEM245Q9H330 911 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 RETREG1Q9H6L5 497 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 L2HGDHQ9H9P8 463 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 SEMA4GQ9NTN9 838 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 UBP1Q9NZI7 540 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 KLHL8Q9P2G9 620 aaPredicted RBP9.78□□□□□ -0.84
DDX39A-220ENST00000593008 AMACRQ9UHK6 382 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 EVLQ9UI08 416 aaPredicted RBP9.78□□□□□ -0.84
DDX39A-220ENST00000593008 CYP8B1Q9UNU6 501 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 PLA2G4CQ9UP65 541 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 ZNF148Q9UQR1 794 aa9.78□□□□□ -0.84
DDX39A-220ENST00000593008 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.78□□□□□ -0.84
DDX39A-220ENST00000593008 TTI1O43156 1089 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 RAD51CO43502 376 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 ATP9BO43861 1147 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 EPN2O95208 641 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 PRKCGP05129 697 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 ATP5BP06576 529 aaKnown RBP9.77□□□□□ -0.85
DDX39A-220ENST00000593008 MMP2P08253 660 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 CCNCP24863 283 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 RPL22P35268 128 aaKnown RBP9.77□□□□□ -0.85
DDX39A-220ENST00000593008 DHPSP49366 369 aaPredicted RBP9.77□□□□□ -0.85
DDX39A-220ENST00000593008 CCNHP51946 323 aaPredicted RBP9.77□□□□□ -0.85
DDX39A-220ENST00000593008 SEMG2Q02383 582 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 XRCC4Q13426 336 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 MTM1Q13496 603 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 ENPP2Q13822 863 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 SPARCL1Q14515 664 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 SF3A2Q15428 464 aaKnown RBP9.77□□□□□ -0.85
DDX39A-220ENST00000593008 TRADDQ15628 312 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 C9orf64Q5T6V5 341 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 PMS2CLQ68D20 193 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 RETSATQ6NUM9 610 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 LPCAT2Q7L5N7 544 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 ZNF572Q7Z3I7 529 aaPredicted RBP9.77□□□□□ -0.85
DDX39A-220ENST00000593008 ZSWIM9Q86XI8 627 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 RYBPQ8N488 228 aaPredicted RBP9.77□□□□□ -0.85
DDX39A-220ENST00000593008 TEX26Q8N6G2 289 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 TTC13Q8NBP0 860 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 OR2A12Q8NGT7 310 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 ARRDC2Q8TBH0 407 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 PTPRN2Q92932 1015 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 SPATA13Q96N96 652 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 PRDM16Q9HAZ2 1276 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 NOD2Q9HC29 1040 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 SARDHQ9UL12 918 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 NEU2Q9Y3R4 380 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 SPTBN4Q9H254 2564 aa9.77□□□□□ -0.85
DDX39A-220ENST00000593008 MYO18AQ92614 2054 aaKnown RBP9.76□□□□□ -0.85
DDX39A-220ENST00000593008 IGHV1OR15-9A0A0B4J2B8 117 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 GOLGA6L10A0A0M3HER8 536 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 A0A0U1RQS6 177 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 TCRBV7S3A2A0A539 114 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 ESYT3A0FGR9 886 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 HACD1B0YJ81 288 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 NPC1O15118 1278 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 GDF9O60383 454 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 MT-CYBP00156 380 aaPredicted RBP9.76□□□□□ -0.85
DDX39A-220ENST00000593008 ASLP04424 464 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 ITGAVP06756 1048 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 SRPRAP08240 638 aaKnown RBP9.76□□□□□ -0.85
DDX39A-220ENST00000593008 CR2P20023 1033 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 MPLP40238 635 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 CD86P42081 329 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 PAFAH1B1P43034 410 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 PTGER3P43115 390 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 PSMD8P48556 350 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms