RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 ZNF354CQ86Y25 554 aa23.62■■□□□ 1.37
MBD3-211ENST00000592965 PDCD7Q8N8D1 485 aaKnown RBP23.62■■□□□ 1.37
MBD3-211ENST00000592965 ASB12Q8WXK4 309 aa23.62■■□□□ 1.37
MBD3-211ENST00000592965 ARHGEF26Q96DR7 871 aa23.62■■□□□ 1.37
MBD3-211ENST00000592965 BMFQ96LC9 184 aa23.62■■□□□ 1.37
MBD3-211ENST00000592965 LENG8Q96PV6 779 aaPredicted RBP23.62■■□□□ 1.37
MBD3-211ENST00000592965 C1QTNF2Q9BXJ5 285 aa23.62■■□□□ 1.37
MBD3-211ENST00000592965 TTYH3Q9C0H2 523 aa23.62■■□□□ 1.37
MBD3-211ENST00000592965 KLC2Q9H0B6 622 aa23.62■■□□□ 1.37
MBD3-211ENST00000592965 DONSONQ9NYP3 566 aa23.62■■□□□ 1.37
MBD3-211ENST00000592965 AIPL1Q9NZN9 384 aa23.62■■□□□ 1.37
MBD3-211ENST00000592965 MFHAS1Q9Y4C4 1052 aa23.62■■□□□ 1.37
MBD3-211ENST00000592965 A0A1B0GTH6 734 aa23.61■■□□□ 1.37
MBD3-211ENST00000592965 TRABD2BA6NFA1 517 aa23.61■■□□□ 1.37
MBD3-211ENST00000592965 EIF3CLB5ME19 914 aaKnown RBP23.61■■□□□ 1.37
MBD3-211ENST00000592965 TRIM38O00635 465 aa23.61■■□□□ 1.37
MBD3-211ENST00000592965 AREL1O15033 823 aa23.61■■□□□ 1.37
MBD3-211ENST00000592965 RAD51BO15315 384 aa23.61■■□□□ 1.37
MBD3-211ENST00000592965 SPINT1O43278 529 aa23.61■■□□□ 1.37
MBD3-211ENST00000592965 IGSF6O95976 241 aa23.61■■□□□ 1.37
MBD3-211ENST00000592965 PAK4O96013 591 aaPredicted RBP23.61■■□□□ 1.37
MBD3-211ENST00000592965 DGKAP23743 735 aa23.61■■□□□ 1.37
MBD3-211ENST00000592965 HNF1BP35680 557 aa23.61■■□□□ 1.37
MBD3-211ENST00000592965 PRKCIP41743 596 aa23.61■■□□□ 1.37
MBD3-211ENST00000592965 ZNF165P49910 485 aa23.61■■□□□ 1.37
MBD3-211ENST00000592965 CAVIN1Q6NZI2 390 aaKnown RBP23.61■■□□□ 1.37
MBD3-211ENST00000592965 KLHL32Q96NJ5 620 aa23.61■■□□□ 1.37
MBD3-211ENST00000592965 EIF3CQ99613 913 aaKnown RBP23.61■■□□□ 1.37
MBD3-211ENST00000592965 POM121BA6NF01 834 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 IGLON5A6NGN9 336 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 TMCO5BA8MYB1 307 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 SIGLEC6O43699 453 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 PIAS2O75928 621 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 GZMAP12544 262 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 ACP1P24666 158 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 PSMA2P25787 234 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 TPI1P60174 286 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 RAD51Q06609 339 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 SGCGQ13326 291 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 E4F1Q66K89 784 aaPredicted RBP23.6■■□□□ 1.37
MBD3-211ENST00000592965 GDPD4Q6W3E5 623 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 DENND6BQ8NEG7 585 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 OR4C6Q8NH72 309 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 KLF6Q99612 283 aaPredicted RBP23.6■■□□□ 1.37
MBD3-211ENST00000592965 HAUS4Q9H6D7 363 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 UCKL1Q9NWZ5 548 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 GGT7Q9UJ14 662 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 AP4E1Q9UPM8 1137 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 ITM2BQ9Y287 266 aa23.6■■□□□ 1.37
MBD3-211ENST00000592965 ADAMTS20P59510 1910 aa23.59■■□□□ 1.37
MBD3-211ENST00000592965 NEMP1O14524 444 aa23.59■■□□□ 1.37
MBD3-211ENST00000592965 ATMINO43313 823 aaPredicted RBP23.59■■□□□ 1.37
MBD3-211ENST00000592965 RABIFP47224 123 aa23.59■■□□□ 1.37
MBD3-211ENST00000592965 RHOAP61586 193 aa23.59■■□□□ 1.37
MBD3-211ENST00000592965 ZNF571Q7Z3V5 609 aaPredicted RBP23.59■■□□□ 1.37
MBD3-211ENST00000592965 FNIP1Q8TF40 1166 aa23.59■■□□□ 1.37
MBD3-211ENST00000592965 EDEM3Q9BZQ6 932 aa23.59■■□□□ 1.37
MBD3-211ENST00000592965 LRRC19Q9H756 370 aa23.59■■□□□ 1.37
MBD3-211ENST00000592965 DKK3Q9UBP4 350 aa23.59■■□□□ 1.37
MBD3-211ENST00000592965 RALYQ9UKM9 306 aaKnown RBP23.59■■□□□ 1.37
MBD3-211ENST00000592965 TMEM191CA6NGB0 347 aa23.58■■□□□ 1.37
MBD3-211ENST00000592965 FPGTO14772 594 aa23.58■■□□□ 1.37
MBD3-211ENST00000592965 NDST2P52849 883 aa23.58■■□□□ 1.37
MBD3-211ENST00000592965 FZD2Q14332 565 aa23.58■■□□□ 1.37
MBD3-211ENST00000592965 HES3Q5TGS1 186 aa23.58■■□□□ 1.37
MBD3-211ENST00000592965 ARFGAP1Q8N6T3 406 aa23.58■■□□□ 1.37
MBD3-211ENST00000592965 RFFLQ8WZ73 363 aa23.58■■□□□ 1.37
MBD3-211ENST00000592965 NAP1L5Q96NT1 182 aaPredicted RBP23.58■■□□□ 1.37
MBD3-211ENST00000592965 FUCA2Q9BTY2 467 aa23.58■■□□□ 1.37
MBD3-211ENST00000592965 CPEB1Q9BZB8 566 aaKnown RBP23.58■■□□□ 1.37
MBD3-211ENST00000592965 PDFQ9HBH1 243 aa23.58■■□□□ 1.37
MBD3-211ENST00000592965 GPATCH2LQ9NWQ4 482 aa23.58■■□□□ 1.37
MBD3-211ENST00000592965 LHX3Q9UBR4 397 aa23.58■■□□□ 1.37
MBD3-211ENST00000592965 UBA2Q9UBT2 640 aaPredicted RBP23.58■■□□□ 1.37
MBD3-211ENST00000592965 LRRK1Q38SD2 2015 aa23.58■■□□□ 1.37
MBD3-211ENST00000592965 SPTY2D1-AS1A0A0U1RR47 76 aa23.57■■□□□ 1.36
MBD3-211ENST00000592965 GIMD1P0DJR0 217 aa23.57■■□□□ 1.36
MBD3-211ENST00000592965 JUPP14923 745 aa23.57■■□□□ 1.36
MBD3-211ENST00000592965 NME1P15531 152 aaKnown RBP23.57■■□□□ 1.36
MBD3-211ENST00000592965 HNRNPKP61978 463 aaKnown RBP eCLIP23.57■■□□□ 1.36
MBD3-211ENST00000592965 CYP4F3Q08477 520 aa23.57■■□□□ 1.36
MBD3-211ENST00000592965 IQCB1Q15051 598 aa23.57■■□□□ 1.36
MBD3-211ENST00000592965 HS1BP3Q53T59 392 aa23.57■■□□□ 1.36
MBD3-211ENST00000592965 PARGQ86W56 976 aa23.57■■□□□ 1.36
MBD3-211ENST00000592965 PEBP4Q96S96 227 aa23.57■■□□□ 1.36
MBD3-211ENST00000592965 DHX35Q9H5Z1 703 aaKnown RBP23.57■■□□□ 1.36
MBD3-211ENST00000592965 DNAJC28Q9NX36 388 aa23.57■■□□□ 1.36
MBD3-211ENST00000592965 NLGN3Q9NZ94 848 aa23.57■■□□□ 1.36
MBD3-211ENST00000592965 GPSM3Q9Y4H4 160 aa23.57■■□□□ 1.36
MBD3-211ENST00000592965 ANKRD36A6QL64 1941 aa23.57■■□□□ 1.36
MBD3-211ENST00000592965 EEF2KO00418 725 aaKnown RBP23.56■■□□□ 1.36
MBD3-211ENST00000592965 DDX3XO00571 662 aaKnown RBP eCLIP23.56■■□□□ 1.363e-8■■■□□ 14.7
MBD3-211ENST00000592965 FFAR2O15552 330 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 PRAMEF11O60813 436 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 FTLP02792 175 aaPredicted RBP23.56■■□□□ 1.36
MBD3-211ENST00000592965 ALPPL2P10696 532 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 SUOXP51687 545 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 CLDN6P56747 220 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 KLHL30Q0D2K2 578 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 CYTH1Q15438 398 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms