RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 EPC1Q9H2F5 836 aa10.07□□□□□ -0.8
TPM4-216ENST00000592822 C10orf88Q9H8K7 445 aa10.07□□□□□ -0.8
TPM4-216ENST00000592822 NOD2Q9HC29 1040 aa10.07□□□□□ -0.8
TPM4-216ENST00000592822 NT5MQ9NPB1 228 aa10.07□□□□□ -0.8
TPM4-216ENST00000592822 RBM22Q9NW64 420 aaKnown RBP eCLIP10.07□□□□□ -0.8
TPM4-216ENST00000592822 WSB2Q9NYS7 404 aaPredicted RBP10.07□□□□□ -0.8
TPM4-216ENST00000592822 FZD4Q9ULV1 537 aa10.07□□□□□ -0.8
TPM4-216ENST00000592822 NCKAP1Q9Y2A7 1128 aa10.07□□□□□ -0.8
TPM4-216ENST00000592822 R3HDM2Q9Y2K5 976 aaKnown RBP10.07□□□□□ -0.8
TPM4-216ENST00000592822 ATP8A1Q9Y2Q0 1164 aa10.07□□□□□ -0.8
TPM4-216ENST00000592822 ARIH1Q9Y4X5 557 aaPredicted RBP10.07□□□□□ -0.8
TPM4-216ENST00000592822 SDK1Q7Z5N4 2213 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 TNRC6BQ9UPQ9 1833 aaKnown RBP10.06□□□□□ -0.8
TPM4-216ENST00000592822 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 HACD1B0YJ81 288 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 H7C0C1 242 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 MAP3K13O43283 966 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 HLA-DQB2P05538 268 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 ITGB7P26010 798 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 ATP5OP48047 213 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 SCNN1BP51168 640 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 TAS2R38P59533 333 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 EIF3EP60228 445 aaKnown RBP10.06□□□□□ -0.8
TPM4-216ENST00000592822 GNG11P61952 73 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 AP1S1P61966 158 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 DSC2Q02487 901 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 RAD51Q06609 339 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 WASHC5Q12768 1159 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 SFSWAPQ12872 951 aaKnown RBP10.06□□□□□ -0.8
TPM4-216ENST00000592822 PLK5Q496M5 336 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 ZNF805Q5CZA5 627 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 PIP5KL1Q5T9C9 394 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 ALG1LQ6GMV1 187 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.06□□□□□ -0.8
TPM4-216ENST00000592822 SLC36A4Q6YBV0 504 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 PRR23BQ6ZRT6 265 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 PARS2Q7L3T8 475 aaKnown RBP10.06□□□□□ -0.8
TPM4-216ENST00000592822 ADAT2Q7Z6V5 191 aaKnown RBP10.06□□□□□ -0.8
TPM4-216ENST00000592822 C11orf74Q86VG3 221 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 CAMK1DQ8IU85 385 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 TMEFF1Q8IYR6 380 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 BBS5Q8N3I7 341 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 SUMF1Q8NBK3 374 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 ARRDC2Q8TBH0 407 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 ZC3H10Q96K80 434 aaKnown RBP10.06□□□□□ -0.8
TPM4-216ENST00000592822 KLHL32Q96NJ5 620 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 TUBGCP5Q96RT8 1024 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 WDR24Q96S15 920 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 PHOX2BQ99453 314 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 SEMA3CQ99985 751 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 GPR174Q9BXC1 333 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 HDAC8Q9BY41 377 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 DUSP15Q9H1R2 295 aaPredicted RBP10.06□□□□□ -0.8
TPM4-216ENST00000592822 SCUBE2Q9NQ36 999 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 SEPT10Q9P0V9 454 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 AMACRQ9UHK6 382 aa10.06□□□□□ -0.8
TPM4-216ENST00000592822 TSPAN11A1L157 253 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 C16orf96A6NNT2 1141 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 C10orf142B7Z368 130 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 PROB1E7EW31 1015 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 SLC7A4O43246 635 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 CEP104O60308 925 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 NDUFS2O75306 463 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 SEMA4FO95754 770 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 MMP2P08253 660 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 RBP3P10745 1247 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 MSNP26038 577 aaKnown RBP10.05□□□□□ -0.8
TPM4-216ENST00000592822 PTPN3P26045 913 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 RBL1P28749 1068 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 MAPK8P45983 427 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 ADPRHP54922 357 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 RPL6Q02878 288 aaKnown RBP10.05□□□□□ -0.8
TPM4-216ENST00000592822 ITKQ08881 620 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 NIPAL4Q0D2K0 466 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 GRM3Q14832 879 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 SIX1Q15475 284 aaPredicted RBP10.05□□□□□ -0.8
TPM4-216ENST00000592822 LPAL2Q16609 132 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 RALGPS1Q5JS13 557 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 PMS2CLQ68D20 193 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 ERN2Q76MJ5 926 aaKnown RBP10.05□□□□□ -0.8
TPM4-216ENST00000592822 ZSWIM9Q86XI8 627 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 SLC41A1Q8IVJ1 513 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.05□□□□□ -0.8
TPM4-216ENST00000592822 DEFB119Q8N690 84 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 TTC13Q8NBP0 860 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 OR14C36Q8NHC7 312 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 SLC35B2Q8TB61 432 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 HTR3CQ8WXA8 447 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 ATG4AQ8WYN0 398 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 PPP1R16AQ96I34 528 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 TEKT5Q96M29 485 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 ZNF641Q96N77 438 aaPredicted RBP10.05□□□□□ -0.8
TPM4-216ENST00000592822 AGAP3Q96P47 875 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 POLR1EQ9GZS1 481 aaKnown RBP10.05□□□□□ -0.8
TPM4-216ENST00000592822 BTBD1Q9H0C5 482 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 SEMA4AQ9H3S1 761 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 SUV39H2Q9H5I1 410 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 ATP13A3Q9H7F0 1226 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 USP29Q9HBJ7 922 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 SGK2Q9HBY8 427 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms