RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 CLCNKBP51801 687 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 PPATQ06203 517 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 WASHC5Q12768 1159 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 TBL3Q12788 808 aaKnown RBP3.69□□□□□ -1.82
VMP1-212ENST00000591782 ZBTB17Q13105 803 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 SYCP1Q15431 976 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 TAF7Q15545 349 aaPredicted RBP3.69□□□□□ -1.82
VMP1-212ENST00000591782 TWIST1Q15672 202 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 RPE65Q16518 533 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 WDR45BQ5MNZ6 344 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 UBAP2Q5T6F2 1119 aaKnown RBP3.69□□□□□ -1.82
VMP1-212ENST00000591782 TBC1D9BQ66K14 1250 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 PARM1Q6UWI2 310 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 MYOCDQ8IZQ8 938 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 GHDCQ8N2G8 530 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 RASSF8Q8NHQ8 419 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 LPAR1Q92633 364 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 N4BP2L2Q92802 583 aaPredicted RBP3.69□□□□□ -1.82
VMP1-212ENST00000591782 USP13Q92995 863 aaPredicted RBP3.69□□□□□ -1.82
VMP1-212ENST00000591782 CDHR1Q96JP9 859 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 WDR77Q9BQA1 342 aaPredicted RBP3.69□□□□□ -1.82
VMP1-212ENST00000591782 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.69□□□□□ -1.82
VMP1-212ENST00000591782 SEZ6LQ9BYH1 1024 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 KRTAP17-1Q9BYP8 105 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 LMAN2LQ9H0V9 348 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 FAM234AQ9H0X4 552 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 TAOK3Q9H2K8 898 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 RWDD1Q9H446 243 aaPredicted RBP3.69□□□□□ -1.82
VMP1-212ENST00000591782 GRHL1Q9NZI5 618 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 C6orf203Q9P0P8 240 aaPredicted RBP3.69□□□□□ -1.82
VMP1-212ENST00000591782 SEPT10Q9P0V9 454 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 HSF4Q9ULV5 492 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 LRRFIP2Q9Y608 721 aaKnown RBP3.69□□□□□ -1.82
VMP1-212ENST00000591782 SQORQ9Y6N5 450 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 SLC4A4Q9Y6R1 1079 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 PEG3Q9GZU2 1588 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.68□□□□□ -1.82
VMP1-212ENST00000591782 FAM170AA1A519 330 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 PER2O15055 1255 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 BAG4O95429 457 aaKnown RBP3.68□□□□□ -1.82
VMP1-212ENST00000591782 TOMM40O96008 361 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 ADAP00813 363 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 KLKB1P03952 638 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 LDHCP07864 332 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 MSNP26038 577 aaKnown RBP3.68□□□□□ -1.82
VMP1-212ENST00000591782 DPP6P42658 865 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 POLD2P49005 469 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 TLE2Q04725 743 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.68□□□□□ -1.82
VMP1-212ENST00000591782 CCDC173Q0VFZ6 552 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 TDGQ13569 410 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 RBBP5Q15291 538 aaKnown RBP3.68□□□□□ -1.82
VMP1-212ENST00000591782 E2F5Q15329 346 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 SLC18A3Q16572 532 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 ME3Q16798 604 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 Q5PR19 223 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 AWAT2Q6E213 333 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 RETSATQ6NUM9 610 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 TMEM71Q6P5X7 295 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 CPLX2Q6PUV4 134 aaKnown RBP3.68□□□□□ -1.82
VMP1-212ENST00000591782 SLC16A12Q6ZSM3 486 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 CTU1Q7Z7A3 348 aaKnown RBP3.68□□□□□ -1.82
VMP1-212ENST00000591782 DZIP1Q86YF9 867 aaKnown RBP3.68□□□□□ -1.82
VMP1-212ENST00000591782 EFCAB13Q8IY85 973 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 PDCL2Q8N4E4 241 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 ARL6IP6Q8N6S5 226 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 HORMAD2Q8N7B1 307 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 DNAAF1Q8NEP3 725 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 ENGASEQ8NFI3 743 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 TDRD7Q8NHU6 1098 aaKnown RBP3.68□□□□□ -1.82
VMP1-212ENST00000591782 RAB40AQ8WXH6 277 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 AGAP3Q96P47 875 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 CD180Q99467 661 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 POLDIP3Q9BY77 421 aaKnown RBP3.68□□□□□ -1.82
VMP1-212ENST00000591782 GPR63Q9BZJ6 419 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 ISCUQ9H1K1 167 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 DIAPH3Q9NSV4 1193 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 ATP8A2Q9NTI2 1148 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 ALKBH4Q9NXW9 302 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 FBXO2Q9UK22 296 aaPredicted RBP3.68□□□□□ -1.82
VMP1-212ENST00000591782 ATP6V0A2Q9Y487 856 aa3.68□□□□□ -1.82
VMP1-212ENST00000591782 EVPLQ92817 2033 aa3.67□□□□□ -1.82
VMP1-212ENST00000591782 DYTNA2CJ06 578 aa3.67□□□□□ -1.82
VMP1-212ENST00000591782 GAGE12JA6NER3 117 aa3.67□□□□□ -1.82
VMP1-212ENST00000591782 STMND1H3BQB6 276 aa3.67□□□□□ -1.82
VMP1-212ENST00000591782 RNMTO43148 476 aaKnown RBP3.67□□□□□ -1.82
VMP1-212ENST00000591782 MTRF1O75570 445 aaKnown RBP3.67□□□□□ -1.82
VMP1-212ENST00000591782 SERPINC1P01008 464 aa3.67□□□□□ -1.82
VMP1-212ENST00000591782 IL1AP01583 271 aa3.67□□□□□ -1.82
VMP1-212ENST00000591782 CHRM4P08173 479 aa3.67□□□□□ -1.82
VMP1-212ENST00000591782 HOXB2P14652 356 aa3.67□□□□□ -1.82
VMP1-212ENST00000591782 CHRNB2P17787 502 aa3.67□□□□□ -1.82
VMP1-212ENST00000591782 XBP1P17861 261 aa3.67□□□□□ -1.82
VMP1-212ENST00000591782 TBXAS1P24557 533 aaPredicted RBP3.67□□□□□ -1.82
VMP1-212ENST00000591782 STIP1P31948 543 aaKnown RBP3.67□□□□□ -1.82
VMP1-212ENST00000591782 KIF5BP33176 963 aa3.67□□□□□ -1.82
VMP1-212ENST00000591782 PGM1P36871 562 aa3.67□□□□□ -1.82
VMP1-212ENST00000591782 PIK3CAP42336 1068 aa3.67□□□□□ -1.82
VMP1-212ENST00000591782 CCT4P50991 539 aaKnown RBP3.67□□□□□ -1.82
VMP1-212ENST00000591782 ZNF132P52740 706 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms